Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PCDHB7Q9Y5E2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 AL138724.1-201ENST00000606771 1088 ntBASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 AC092666.2-201ENST00000613287 246 ntBASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
PCDHB7Q9Y5E2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB7Q9Y5E2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB7Q9Y5E2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHB7Q9Y5E2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PCDHB7Q9Y5E2 MIR5787-201ENST00000611784 55 ntBASIC24.8■■□□□ 1.56
PCDHB7Q9Y5E2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHB7Q9Y5E2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 AC011298.3-201ENST00000615796 283 ntBASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 AC091060.1-201ENST00000623524 1766 ntBASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHB7Q9Y5E2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 AC145676.1-201ENST00000514988 2004 ntBASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 AC241377.3-202ENST00000626088 1088 ntBASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 AC241585.3-202ENST00000628937 1088 ntBASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 AC245100.8-202ENST00000629247 1058 ntBASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 RASA4CP-201ENST00000424092 1398 ntBASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PCDHB7Q9Y5E2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 CA15P2-201ENST00000611168 834 ntBASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PCDHB7Q9Y5E2 C17orf82-201ENST00000623772 1530 ntBASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 AC027682.1-201ENST00000562846 899 ntBASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 AC008764.7-201ENST00000593779 1081 ntBASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDHB7Q9Y5E2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PCDHB7Q9Y5E2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHB7Q9Y5E2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHB7Q9Y5E2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHB7Q9Y5E2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHB7Q9Y5E2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHB7Q9Y5E2 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHB7Q9Y5E2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDHB7Q9Y5E2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHB7Q9Y5E2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHB7Q9Y5E2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHB7Q9Y5E2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHB7Q9Y5E2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHB7Q9Y5E2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDHB7Q9Y5E2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB7Q9Y5E2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB7Q9Y5E2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHB7Q9Y5E2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PCDHB7Q9Y5E2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PCDHB7Q9Y5E2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHB7Q9Y5E2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB7Q9Y5E2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHB7Q9Y5E2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms