Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
COPS3Q9UNS2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.33■□□□□ 0.85
COPS3Q9UNS2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPS3Q9UNS2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
COPS3Q9UNS2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPS3Q9UNS2 ANOS2P-203ENST00000472227 1816 ntBASIC20.32■□□□□ 0.84
COPS3Q9UNS2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPS3Q9UNS2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.32■□□□□ 0.84
COPS3Q9UNS2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.32■□□□□ 0.84
COPS3Q9UNS2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COPS3Q9UNS2 AC087393.1-201ENST00000582896 145 ntBASIC20.32■□□□□ 0.84
COPS3Q9UNS2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.32■□□□□ 0.84
COPS3Q9UNS2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.32■□□□□ 0.84
COPS3Q9UNS2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 AL592295.1-201ENST00000400984 884 ntBASIC20.31■□□□□ 0.84
COPS3Q9UNS2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPS3Q9UNS2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPS3Q9UNS2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 DUX4L9-201ENST00000449051 1259 ntBASIC20.29■□□□□ 0.84
COPS3Q9UNS2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.29■□□□□ 0.84
COPS3Q9UNS2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPS3Q9UNS2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.27■□□□□ 0.84
COPS3Q9UNS2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COPS3Q9UNS2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.27■□□□□ 0.84
COPS3Q9UNS2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.27■□□□□ 0.84
COPS3Q9UNS2 MIR6765-201ENST00000614092 87 ntBASIC20.27■□□□□ 0.84
COPS3Q9UNS2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS3Q9UNS2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS3Q9UNS2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS3Q9UNS2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPS3Q9UNS2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPS3Q9UNS2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
COPS3Q9UNS2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.27■□□□□ 0.83
COPS3Q9UNS2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COPS3Q9UNS2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COPS3Q9UNS2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms