Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX4Q9UBX2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
DUX4Q9UBX2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 RPS2P7-201ENST00000447334 885 ntBASIC19.89■□□□□ 0.77
DUX4Q9UBX2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DUX4Q9UBX2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DUX4Q9UBX2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DUX4Q9UBX2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.87■□□□□ 0.77
DUX4Q9UBX2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.87■□□□□ 0.77
DUX4Q9UBX2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DUX4Q9UBX2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX4Q9UBX2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX4Q9UBX2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 AC097639.1-201ENST00000565519 1891 ntBASIC19.86■□□□□ 0.77
DUX4Q9UBX2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DUX4Q9UBX2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 AC138932.3-201ENST00000567634 1902 ntBASIC19.85■□□□□ 0.77
DUX4Q9UBX2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 AC087393.1-201ENST00000582896 145 ntBASIC19.85■□□□□ 0.77
DUX4Q9UBX2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX4Q9UBX2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 BHLHE23-202ENST00000612929 1109 ntBASIC19.84■□□□□ 0.77
DUX4Q9UBX2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX4Q9UBX2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DUX4Q9UBX2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.83■□□□□ 0.77
DUX4Q9UBX2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
DUX4Q9UBX2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.83■□□□□ 0.77
DUX4Q9UBX2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DUX4Q9UBX2 AC139795.1-202ENST00000500444 432 ntBASIC19.83■□□□□ 0.77
DUX4Q9UBX2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.83■□□□□ 0.77
DUX4Q9UBX2 AC010980.1-201ENST00000587192 1142 ntBASIC19.83■□□□□ 0.77
DUX4Q9UBX2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.83■□□□□ 0.76
DUX4Q9UBX2 DUSP8P5-201ENST00000422884 1815 ntBASIC19.83■□□□□ 0.76
DUX4Q9UBX2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.83■□□□□ 0.76
DUX4Q9UBX2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
DUX4Q9UBX2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.82■□□□□ 0.76
DUX4Q9UBX2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DUX4Q9UBX2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms