Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PPP4R2Q9NY27 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 USP48-205ENST00000421625 2818 ntTSL 2 BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
PPP4R2Q9NY27 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
PPP4R2Q9NY27 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 CR559946.2-201ENST00000623684 991 ntBASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 AC007375.3-201ENST00000600936 2314 ntBASIC29.36■■■□□ 2.29
PPP4R2Q9NY27 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R2Q9NY27 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC29.34■■■□□ 2.29
PPP4R2Q9NY27 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPP4R2Q9NY27 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC29.33■■■□□ 2.29
PPP4R2Q9NY27 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.33■■■□□ 2.29
PPP4R2Q9NY27 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
PPP4R2Q9NY27 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.33■■■□□ 2.29
PPP4R2Q9NY27 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPP4R2Q9NY27 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPP4R2Q9NY27 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PPP4R2Q9NY27 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PPP4R2Q9NY27 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
PPP4R2Q9NY27 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.31■■■□□ 2.28
PPP4R2Q9NY27 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.31■■■□□ 2.28
PPP4R2Q9NY27 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.31■■■□□ 2.28
PPP4R2Q9NY27 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PPP4R2Q9NY27 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPP4R2Q9NY27 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC29.3■■■□□ 2.28
PPP4R2Q9NY27 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R2Q9NY27 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R2Q9NY27 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
PPP4R2Q9NY27 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R2Q9NY27 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R2Q9NY27 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
PPP4R2Q9NY27 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 AC060814.1-201ENST00000554326 538 ntBASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPP4R2Q9NY27 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
PPP4R2Q9NY27 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.27■■■□□ 2.28
PPP4R2Q9NY27 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPP4R2Q9NY27 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPP4R2Q9NY27 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPP4R2Q9NY27 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC29.26■■■□□ 2.28
PPP4R2Q9NY27 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PPP4R2Q9NY27 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PPP4R2Q9NY27 ZNRF2P2-203ENST00000454624 420 ntBASIC29.26■■■□□ 2.27
PPP4R2Q9NY27 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
PPP4R2Q9NY27 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 AL024507.2-201ENST00000606070 2574 ntBASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
PPP4R2Q9NY27 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms