Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
TRMT13Q9NUP7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 IRS3P-201ENST00000223076 1006 ntBASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 C17orf82-201ENST00000623772 1530 ntBASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
TRMT13Q9NUP7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 AC006455.2-201ENST00000429931 906 ntBASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRMT13Q9NUP7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRMT13Q9NUP7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRMT13Q9NUP7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.34■■□□□ 1.65
TRMT13Q9NUP7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.34■■□□□ 1.65
TRMT13Q9NUP7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
TRMT13Q9NUP7 AL022069.1-201ENST00000568025 1636 ntBASIC25.34■■□□□ 1.65
TRMT13Q9NUP7 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.33■■□□□ 1.65
TRMT13Q9NUP7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.33■■□□□ 1.65
TRMT13Q9NUP7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.33■■□□□ 1.65
TRMT13Q9NUP7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRMT13Q9NUP7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.33■■□□□ 1.64
TRMT13Q9NUP7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 AC136469.2-201ENST00000623944 1028 ntBASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRMT13Q9NUP7 AL121749.1-202ENST00000609313 2153 ntBASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRMT13Q9NUP7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 MIR6089-201ENST00000616698 64 ntBASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 AC241377.3-202ENST00000626088 1088 ntBASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 AC241585.3-202ENST00000628937 1088 ntBASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 AC245100.8-202ENST00000629247 1058 ntBASIC25.3■■□□□ 1.64
TRMT13Q9NUP7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.29■■□□□ 1.64
TRMT13Q9NUP7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
TRMT13Q9NUP7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRMT13Q9NUP7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRMT13Q9NUP7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.28■■□□□ 1.64
TRMT13Q9NUP7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.27■■□□□ 1.64
TRMT13Q9NUP7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRMT13Q9NUP7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRMT13Q9NUP7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRMT13Q9NUP7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRMT13Q9NUP7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 MIR3181-201ENST00000578512 73 ntBASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 AC233992.3-201ENST00000607491 485 ntBASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TRMT13Q9NUP7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 AC009086.3-201ENST00000623486 1008 ntBASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.25■■□□□ 1.63
TRMT13Q9NUP7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRMT13Q9NUP7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRMT13Q9NUP7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRMT13Q9NUP7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRMT13Q9NUP7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
TRMT13Q9NUP7 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 1184.6 ms