Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.54■■□□□ 1.04
NEUROD4Q9HD90 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 KRT18P24-201ENST00000344739 1156 ntBASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 THA1P-201ENST00000590384 1145 ntBASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 AC131274.2-201ENST00000580697 1507 ntBASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NEUROD4Q9HD90 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 AC010980.1-201ENST00000587192 1142 ntBASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.52■■□□□ 1.04
NEUROD4Q9HD90 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NEUROD4Q9HD90 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEUROD4Q9HD90 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEUROD4Q9HD90 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
NEUROD4Q9HD90 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.5■■□□□ 1.03
NEUROD4Q9HD90 PVT1_1.1-201ENST00000615125 194 ntBASIC21.5■■□□□ 1.03
NEUROD4Q9HD90 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 MIR4281-201ENST00000580852 62 ntBASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NEUROD4Q9HD90 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 ALDH1A3-203ENST00000557963 1670 ntBASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NEUROD4Q9HD90 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 MIR4508-201ENST00000584178 70 ntBASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.47■■□□□ 1.03
NEUROD4Q9HD90 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEUROD4Q9HD90 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms