Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDH18Q9HCL0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDH18Q9HCL0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH18Q9HCL0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH18Q9HCL0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH18Q9HCL0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH18Q9HCL0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH18Q9HCL0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH18Q9HCL0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDH18Q9HCL0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH18Q9HCL0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDH18Q9HCL0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
PCDH18Q9HCL0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 AC137630.3-201ENST00000607245 391 ntBASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDH18Q9HCL0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 AC004448.1-201ENST00000458332 883 ntBASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 RARRES2P1-201ENST00000474487 481 ntBASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 ALDH1A3-203ENST00000557963 1670 ntBASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH18Q9HCL0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH18Q9HCL0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDH18Q9HCL0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
PCDH18Q9HCL0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH18Q9HCL0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PCDH18Q9HCL0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PCDH18Q9HCL0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDH18Q9HCL0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 SNX5-217ENST00000606557 1087 ntBASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH18Q9HCL0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms