Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.21■■□□□ 1.31
CHRDQ9H2X0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRDQ9H2X0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 AC022517.1-201ENST00000592429 346 ntBASIC23.2■■□□□ 1.3
CHRDQ9H2X0 IKBKGP1-201ENST00000612193 1073 ntBASIC23.2■■□□□ 1.3
CHRDQ9H2X0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHRDQ9H2X0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 AC006455.2-201ENST00000429931 906 ntBASIC23.19■■□□□ 1.3
CHRDQ9H2X0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHRDQ9H2X0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 AC010501.1-201ENST00000606270 1962 ntBASIC23.18■■□□□ 1.3
CHRDQ9H2X0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRDQ9H2X0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 MIR3181-201ENST00000578512 73 ntBASIC23.17■■□□□ 1.3
CHRDQ9H2X0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 AL137784.2-201ENST00000607332 1000 ntBASIC23.17■■□□□ 1.3
CHRDQ9H2X0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CHRDQ9H2X0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 KRT18P5-201ENST00000436075 1291 ntBASIC23.16■■□□□ 1.3
CHRDQ9H2X0 YBX1P1-201ENST00000445822 960 ntBASIC23.16■■□□□ 1.3
CHRDQ9H2X0 AC009086.3-201ENST00000623486 1008 ntBASIC23.16■■□□□ 1.3
CHRDQ9H2X0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.16■■□□□ 1.3
CHRDQ9H2X0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CHRDQ9H2X0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.15■■□□□ 1.3
CHRDQ9H2X0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CHRDQ9H2X0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHRDQ9H2X0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.14■■□□□ 1.3
CHRDQ9H2X0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHRDQ9H2X0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRDQ9H2X0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRDQ9H2X0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHRDQ9H2X0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.13■■□□□ 1.29
CHRDQ9H2X0 AL031602.1-201ENST00000633169 911 ntBASIC23.13■■□□□ 1.29
CHRDQ9H2X0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CHRDQ9H2X0 AL022069.1-201ENST00000568025 1636 ntBASIC23.12■■□□□ 1.29
CHRDQ9H2X0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.12■■□□□ 1.29
CHRDQ9H2X0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRDQ9H2X0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHRDQ9H2X0 SLC47A1P1-202ENST00000449666 945 ntBASIC23.12■■□□□ 1.29
CHRDQ9H2X0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.12■■□□□ 1.29
CHRDQ9H2X0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.12■■□□□ 1.29
CHRDQ9H2X0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 AC092437.1-201ENST00000624794 1048 ntBASIC23.11■■□□□ 1.29
CHRDQ9H2X0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.11■■□□□ 1.29
CHRDQ9H2X0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms