Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX47Q9H0S4 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.83■■□□□ 1.41
DDX47Q9H0S4 C1orf229-201ENST00000623686 2258 ntBASIC23.83■■□□□ 1.41
DDX47Q9H0S4 AC092068.2-201ENST00000590491 1708 ntBASIC23.83■■□□□ 1.41
DDX47Q9H0S4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX47Q9H0S4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DDX47Q9H0S4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.83■■□□□ 1.4
DDX47Q9H0S4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
DDX47Q9H0S4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.83■■□□□ 1.4
DDX47Q9H0S4 AC090877.2-201ENST00000558441 1738 ntBASIC23.82■■□□□ 1.4
DDX47Q9H0S4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX47Q9H0S4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX47Q9H0S4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX47Q9H0S4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
DDX47Q9H0S4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX47Q9H0S4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX47Q9H0S4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX47Q9H0S4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX47Q9H0S4 GPX1-201ENST00000419349 1106 ntBASIC23.8■■□□□ 1.4
DDX47Q9H0S4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX47Q9H0S4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX47Q9H0S4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
DDX47Q9H0S4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX47Q9H0S4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX47Q9H0S4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX47Q9H0S4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX47Q9H0S4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX47Q9H0S4 AC133552.2-201ENST00000619106 1032 ntBASIC23.78■■□□□ 1.4
DDX47Q9H0S4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
DDX47Q9H0S4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX47Q9H0S4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX47Q9H0S4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX47Q9H0S4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 RPS2P7-201ENST00000447334 885 ntBASIC23.76■■□□□ 1.39
DDX47Q9H0S4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX47Q9H0S4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
DDX47Q9H0S4 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 LINC00565-201ENST00000562710 2331 ntBASIC23.74■■□□□ 1.39
DDX47Q9H0S4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX47Q9H0S4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX47Q9H0S4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms