Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.02■□□□□ 0.8
VRK1Q99986 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VRK1Q99986 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VRK1Q99986 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
VRK1Q99986 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK1Q99986 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK1Q99986 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK1Q99986 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.01■□□□□ 0.79
VRK1Q99986 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.01■□□□□ 0.79
VRK1Q99986 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK1Q99986 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
VRK1Q99986 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.01■□□□□ 0.79
VRK1Q99986 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK1Q99986 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK1Q99986 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
VRK1Q99986 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20■□□□□ 0.79
VRK1Q99986 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20■□□□□ 0.79
VRK1Q99986 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20■□□□□ 0.79
VRK1Q99986 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
VRK1Q99986 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20■□□□□ 0.79
VRK1Q99986 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK1Q99986 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20■□□□□ 0.79
VRK1Q99986 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VRK1Q99986 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VRK1Q99986 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.99■□□□□ 0.79
VRK1Q99986 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VRK1Q99986 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
VRK1Q99986 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.99■□□□□ 0.79
VRK1Q99986 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
VRK1Q99986 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
VRK1Q99986 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VRK1Q99986 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK1Q99986 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK1Q99986 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.98■□□□□ 0.79
VRK1Q99986 AC092028.1-203ENST00000608262 953 ntBASIC19.98■□□□□ 0.79
VRK1Q99986 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.98■□□□□ 0.79
VRK1Q99986 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.98■□□□□ 0.79
VRK1Q99986 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VRK1Q99986 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.97■□□□□ 0.79
VRK1Q99986 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.97■□□□□ 0.79
VRK1Q99986 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VRK1Q99986 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VRK1Q99986 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.96■□□□□ 0.79
VRK1Q99986 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VRK1Q99986 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
VRK1Q99986 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VRK1Q99986 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VRK1Q99986 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VRK1Q99986 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.95■□□□□ 0.78
VRK1Q99986 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.95■□□□□ 0.78
VRK1Q99986 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VRK1Q99986 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.95■□□□□ 0.78
VRK1Q99986 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VRK1Q99986 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.94■□□□□ 0.78
VRK1Q99986 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.94■□□□□ 0.78
VRK1Q99986 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VRK1Q99986 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VRK1Q99986 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK1Q99986 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK1Q99986 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK1Q99986 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.93■□□□□ 0.78
VRK1Q99986 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.93■□□□□ 0.78
VRK1Q99986 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK1Q99986 AC008406.3-201ENST00000620001 1374 ntBASIC19.93■□□□□ 0.78
VRK1Q99986 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms