Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC241585.3-202ENST00000628937 1088 ntBASIC31.12■■■□□ 2.57
ABCA3Q99758 AC245100.8-202ENST00000629247 1058 ntBASIC31.12■■■□□ 2.57
ABCA3Q99758 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.11■■■□□ 2.57
ABCA3Q99758 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.11■■■□□ 2.57
ABCA3Q99758 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.11■■■□□ 2.57
ABCA3Q99758 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
ABCA3Q99758 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA3Q99758 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
ABCA3Q99758 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA3Q99758 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.1■■■□□ 2.57
ABCA3Q99758 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.1■■■□□ 2.57
ABCA3Q99758 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA3Q99758 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA3Q99758 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA3Q99758 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC31.1■■■□□ 2.57
ABCA3Q99758 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ABCA3Q99758 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA3Q99758 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
ABCA3Q99758 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA3Q99758 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC31.09■■■□□ 2.57
ABCA3Q99758 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.09■■■□□ 2.57
ABCA3Q99758 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ABCA3Q99758 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA3Q99758 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
ABCA3Q99758 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.08■■■□□ 2.57
ABCA3Q99758 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.08■■■□□ 2.57
ABCA3Q99758 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.08■■■□□ 2.57
ABCA3Q99758 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.08■■■□□ 2.57
ABCA3Q99758 AC009086.3-201ENST00000623486 1008 ntBASIC31.08■■■□□ 2.57
ABCA3Q99758 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
ABCA3Q99758 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
ABCA3Q99758 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.07■■■□□ 2.57
ABCA3Q99758 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.07■■■□□ 2.56
ABCA3Q99758 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA3Q99758 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA3Q99758 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.07■■■□□ 2.56
ABCA3Q99758 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA3Q99758 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.07■■■□□ 2.56
ABCA3Q99758 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA3Q99758 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ABCA3Q99758 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.07■■■□□ 2.56
ABCA3Q99758 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
ABCA3Q99758 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.06■■■□□ 2.56
ABCA3Q99758 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
ABCA3Q99758 TSPY26P-201ENST00000476365 1326 ntBASIC31.05■■■□□ 2.56
ABCA3Q99758 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
ABCA3Q99758 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC31.05■■■□□ 2.56
ABCA3Q99758 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.05■■■□□ 2.56
ABCA3Q99758 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.05■■■□□ 2.56
ABCA3Q99758 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
ABCA3Q99758 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA3Q99758 AC010501.1-201ENST00000606270 1962 ntBASIC31.04■■■□□ 2.56
ABCA3Q99758 AC004911.1-201ENST00000416316 871 ntBASIC31.04■■■□□ 2.56
ABCA3Q99758 AC142086.6-201ENST00000621154 1765 ntBASIC31.04■■■□□ 2.56
ABCA3Q99758 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA3Q99758 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
ABCA3Q99758 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.04■■■□□ 2.56
ABCA3Q99758 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
ABCA3Q99758 VPS53-216ENST00000574029 585 ntTSL 4 BASIC31.04■■■□□ 2.56
ABCA3Q99758 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
ABCA3Q99758 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA3Q99758 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
ABCA3Q99758 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.03■■■□□ 2.56
ABCA3Q99758 MIR3181-201ENST00000578512 73 ntBASIC31.03■■■□□ 2.56
ABCA3Q99758 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA3Q99758 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.03■■■□□ 2.56
ABCA3Q99758 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA3Q99758 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
ABCA3Q99758 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
ABCA3Q99758 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.01■■■□□ 2.56
ABCA3Q99758 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.01■■■□□ 2.55
ABCA3Q99758 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC31.01■■■□□ 2.55
ABCA3Q99758 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA3Q99758 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA3Q99758 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA3Q99758 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31■■■□□ 2.55
ABCA3Q99758 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31■■■□□ 2.55
ABCA3Q99758 MIR6089-201ENST00000616698 64 ntBASIC31■■■□□ 2.55
ABCA3Q99758 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31■■■□□ 2.55
ABCA3Q99758 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
ABCA3Q99758 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31■■■□□ 2.55
ABCA3Q99758 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
ABCA3Q99758 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.99■■■□□ 2.55
ABCA3Q99758 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.99■■■□□ 2.55
ABCA3Q99758 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 AC123595.1-201ENST00000440769 1046 ntBASIC30.98■■■□□ 2.55
ABCA3Q99758 IGHV3-19-201ENST00000521488 291 ntBASIC30.98■■■□□ 2.55
ABCA3Q99758 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.98■■■□□ 2.55
ABCA3Q99758 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.98■■■□□ 2.55
ABCA3Q99758 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA3Q99758 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA3Q99758 CCDC92B-201ENST00000575506 885 ntBASIC30.98■■■□□ 2.55
ABCA3Q99758 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA3Q99758 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
ABCA3Q99758 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms