Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV9Q99603 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV9Q99603 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV9Q99603 C9orf163-202ENST00000624034 2573 ntBASIC17.84■□□□□ 0.45
TRGV9Q99603 AL022069.1-201ENST00000568025 1636 ntBASIC17.83■□□□□ 0.45
TRGV9Q99603 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.83■□□□□ 0.45
TRGV9Q99603 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV9Q99603 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TRGV9Q99603 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV9Q99603 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV9Q99603 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV9Q99603 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRGV9Q99603 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV9Q99603 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRGV9Q99603 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV9Q99603 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV9Q99603 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV9Q99603 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV9Q99603 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV9Q99603 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV9Q99603 DUX4L9-201ENST00000449051 1259 ntBASIC17.82■□□□□ 0.44
TRGV9Q99603 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV9Q99603 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRGV9Q99603 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV9Q99603 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV9Q99603 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV9Q99603 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.81■□□□□ 0.44
TRGV9Q99603 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRGV9Q99603 LONRF2P2-201ENST00000439212 571 ntBASIC17.81■□□□□ 0.44
TRGV9Q99603 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.81■□□□□ 0.44
TRGV9Q99603 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV9Q99603 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRGV9Q99603 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV9Q99603 DUSP8P3-201ENST00000399571 1760 ntBASIC17.81■□□□□ 0.44
TRGV9Q99603 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TRGV9Q99603 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV9Q99603 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRGV9Q99603 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRGV9Q99603 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.8■□□□□ 0.44
TRGV9Q99603 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRGV9Q99603 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV9Q99603 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRGV9Q99603 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV9Q99603 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV9Q99603 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.8■□□□□ 0.44
TRGV9Q99603 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV9Q99603 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV9Q99603 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.8■□□□□ 0.44
TRGV9Q99603 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV9Q99603 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRGV9Q99603 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRGV9Q99603 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRGV9Q99603 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 AC011551.1-201ENST00000614101 683 ntBASIC17.79■□□□□ 0.44
TRGV9Q99603 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV9Q99603 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
TRGV9Q99603 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRGV9Q99603 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.78■□□□□ 0.44
TRGV9Q99603 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRGV9Q99603 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV9Q99603 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRGV9Q99603 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV9Q99603 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV9Q99603 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV9Q99603 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV9Q99603 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.77■□□□□ 0.44
TRGV9Q99603 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV9Q99603 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV9Q99603 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.77■□□□□ 0.44
TRGV9Q99603 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRGV9Q99603 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRGV9Q99603 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRGV9Q99603 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV9Q99603 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV9Q99603 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.76■□□□□ 0.43
TRGV9Q99603 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV9Q99603 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRGV9Q99603 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRGV9Q99603 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV9Q99603 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV9Q99603 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.75■□□□□ 0.43
TRGV9Q99603 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.75■□□□□ 0.43
TRGV9Q99603 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.75■□□□□ 0.43
TRGV9Q99603 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRGV9Q99603 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV9Q99603 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV9Q99603 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV9Q99603 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRGV9Q99603 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms