Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
S1PR3Q99500 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
S1PR3Q99500 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
S1PR3Q99500 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.79■□□□□ 0.6
S1PR3Q99500 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.79■□□□□ 0.6
S1PR3Q99500 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.79■□□□□ 0.6
S1PR3Q99500 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
S1PR3Q99500 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
S1PR3Q99500 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
S1PR3Q99500 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
S1PR3Q99500 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
S1PR3Q99500 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
S1PR3Q99500 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
S1PR3Q99500 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 AL022069.1-201ENST00000568025 1636 ntBASIC18.78■□□□□ 0.6
S1PR3Q99500 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S1PR3Q99500 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.77■□□□□ 0.6
S1PR3Q99500 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.77■□□□□ 0.6
S1PR3Q99500 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
S1PR3Q99500 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.77■□□□□ 0.6
S1PR3Q99500 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.77■□□□□ 0.6
S1PR3Q99500 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
S1PR3Q99500 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
S1PR3Q99500 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
S1PR3Q99500 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.76■□□□□ 0.59
S1PR3Q99500 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
S1PR3Q99500 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.76■□□□□ 0.59
S1PR3Q99500 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
S1PR3Q99500 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
S1PR3Q99500 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
S1PR3Q99500 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
S1PR3Q99500 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
S1PR3Q99500 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
S1PR3Q99500 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
S1PR3Q99500 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
S1PR3Q99500 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.76■□□□□ 0.59
S1PR3Q99500 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
S1PR3Q99500 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.75■□□□□ 0.59
S1PR3Q99500 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.75■□□□□ 0.59
S1PR3Q99500 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
S1PR3Q99500 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
S1PR3Q99500 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
S1PR3Q99500 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 DUSP8P5-201ENST00000422884 1815 ntBASIC18.74■□□□□ 0.59
S1PR3Q99500 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.74■□□□□ 0.59
S1PR3Q99500 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.74■□□□□ 0.59
S1PR3Q99500 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 MIR4508-201ENST00000584178 70 ntBASIC18.74■□□□□ 0.59
S1PR3Q99500 THA1P-201ENST00000590384 1145 ntBASIC18.74■□□□□ 0.59
S1PR3Q99500 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.74■□□□□ 0.59
S1PR3Q99500 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 KRT8P33-201ENST00000508125 1423 ntBASIC18.74■□□□□ 0.59
S1PR3Q99500 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
S1PR3Q99500 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
S1PR3Q99500 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.73■□□□□ 0.59
S1PR3Q99500 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 YBX1P4-201ENST00000392794 808 ntBASIC18.73■□□□□ 0.59
S1PR3Q99500 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.73■□□□□ 0.59
S1PR3Q99500 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.73■□□□□ 0.59
S1PR3Q99500 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.73■□□□□ 0.59
S1PR3Q99500 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
S1PR3Q99500 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.73■□□□□ 0.59
S1PR3Q99500 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
S1PR3Q99500 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.72■□□□□ 0.59
S1PR3Q99500 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
S1PR3Q99500 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
S1PR3Q99500 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
S1PR3Q99500 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms