Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40CQ96S21 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40CQ96S21 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RAB40CQ96S21 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40CQ96S21 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40CQ96S21 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40CQ96S21 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40CQ96S21 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40CQ96S21 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40CQ96S21 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40CQ96S21 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40CQ96S21 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 LINC00526-201ENST00000581067 1875 ntBASIC18.49■□□□□ 0.55
RAB40CQ96S21 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40CQ96S21 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB40CQ96S21 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RAB40CQ96S21 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB40CQ96S21 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40CQ96S21 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 C1orf229-201ENST00000623686 2258 ntBASIC18.48■□□□□ 0.55
RAB40CQ96S21 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40CQ96S21 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RAB40CQ96S21 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RAB40CQ96S21 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB40CQ96S21 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 GUSBP5-202ENST00000510805 1989 ntBASIC18.47■□□□□ 0.55
RAB40CQ96S21 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
RAB40CQ96S21 AL161729.1-201ENST00000604104 1402 ntBASIC18.47■□□□□ 0.55
RAB40CQ96S21 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40CQ96S21 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RAB40CQ96S21 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB40CQ96S21 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB40CQ96S21 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
RAB40CQ96S21 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40CQ96S21 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB40CQ96S21 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 RP9P-202ENST00000450133 1212 ntBASIC18.45■□□□□ 0.54
RAB40CQ96S21 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RAB40CQ96S21 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB40CQ96S21 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40CQ96S21 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 ECEL1P1-201ENST00000373592 1742 ntBASIC18.44■□□□□ 0.54
RAB40CQ96S21 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 AC060814.1-201ENST00000554326 538 ntBASIC18.44■□□□□ 0.54
RAB40CQ96S21 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 AC137767.1-201ENST00000602918 1920 ntBASIC18.44■□□□□ 0.54
RAB40CQ96S21 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40CQ96S21 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40CQ96S21 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40CQ96S21 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.43■□□□□ 0.54
RAB40CQ96S21 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RAB40CQ96S21 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms