Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.08■□□□□ 0.65
GAFA1Q96PS6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.08■□□□□ 0.65
GAFA1Q96PS6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAFA1Q96PS6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GAFA1Q96PS6 GUSBP5-201ENST00000418136 578 ntBASIC19.08■□□□□ 0.64
GAFA1Q96PS6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.08■□□□□ 0.64
GAFA1Q96PS6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GAFA1Q96PS6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GAFA1Q96PS6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GAFA1Q96PS6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 MTDHP2-201ENST00000601468 714 ntBASIC19.07■□□□□ 0.64
GAFA1Q96PS6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 ABCB10P4-201ENST00000566803 2184 ntBASIC19.07■□□□□ 0.64
GAFA1Q96PS6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 ALDH1A3-203ENST00000557963 1670 ntBASIC19.07■□□□□ 0.64
GAFA1Q96PS6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GAFA1Q96PS6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 UNC93B8-201ENST00000511903 705 ntBASIC19.06■□□□□ 0.64
GAFA1Q96PS6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GAFA1Q96PS6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 MIR6722-201ENST00000617286 78 ntBASIC19.05■□□□□ 0.64
GAFA1Q96PS6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.05■□□□□ 0.64
GAFA1Q96PS6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GAFA1Q96PS6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 AC010997.5-201ENST00000609182 354 ntBASIC19.03■□□□□ 0.64
GAFA1Q96PS6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GAFA1Q96PS6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.02■□□□□ 0.64
GAFA1Q96PS6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.02■□□□□ 0.64
GAFA1Q96PS6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAFA1Q96PS6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GAFA1Q96PS6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.02■□□□□ 0.64
GAFA1Q96PS6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GAFA1Q96PS6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GAFA1Q96PS6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.02■□□□□ 0.63
GAFA1Q96PS6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms