Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SLC46A1Q96NT5 MIR4767-201ENST00000582827 78 ntBASIC21.97■■□□□ 1.11
SLC46A1Q96NT5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC46A1Q96NT5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC46A1Q96NT5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC46A1Q96NT5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC46A1Q96NT5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.96■■□□□ 1.11
SLC46A1Q96NT5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 RASA4CP-201ENST00000424092 1398 ntBASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC46A1Q96NT5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 CA15P2-201ENST00000611168 834 ntBASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC46A1Q96NT5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.93■■□□□ 1.1
SLC46A1Q96NT5 SLC6A10P-202ENST00000431994 2058 ntBASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 AC087623.3-201ENST00000607047 1098 ntBASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC46A1Q96NT5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 SERBP1P1-201ENST00000396021 1160 ntBASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC46A1Q96NT5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 AL162430.1-201ENST00000480705 870 ntBASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC46A1Q96NT5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC46A1Q96NT5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC46A1Q96NT5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 AC027682.1-201ENST00000562846 899 ntBASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC46A1Q96NT5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 AC020928.2-201ENST00000588717 2197 ntBASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC46A1Q96NT5 AC099791.2-201ENST00000605725 427 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms