Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC46Q96FV0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
LRRC46Q96FV0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC46Q96FV0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC46Q96FV0 SRD5A1P1-201ENST00000442297 786 ntBASIC20.44■□□□□ 0.86
LRRC46Q96FV0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC46Q96FV0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC46Q96FV0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC46Q96FV0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 LINC00543-201ENST00000567234 1845 ntBASIC20.42■□□□□ 0.86
LRRC46Q96FV0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC46Q96FV0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC46Q96FV0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 PBX2P1-201ENST00000493219 1291 ntBASIC20.4■□□□□ 0.86
LRRC46Q96FV0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC46Q96FV0 AC012676.1-201ENST00000574705 1949 ntBASIC20.39■□□□□ 0.86
LRRC46Q96FV0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC46Q96FV0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC46Q96FV0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC46Q96FV0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC46Q96FV0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC46Q96FV0 AC145676.1-201ENST00000514988 2004 ntBASIC20.39■□□□□ 0.85
LRRC46Q96FV0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
LRRC46Q96FV0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC46Q96FV0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 AC005703.6-201ENST00000623265 1329 ntBASIC20.38■□□□□ 0.85
LRRC46Q96FV0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 DUX4L19-201ENST00000557448 1267 ntBASIC20.38■□□□□ 0.85
LRRC46Q96FV0 AC092171.4-201ENST00000609130 632 ntBASIC20.38■□□□□ 0.85
LRRC46Q96FV0 AC106739.1-201ENST00000617035 715 ntBASIC20.38■□□□□ 0.85
LRRC46Q96FV0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC46Q96FV0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 AC004448.1-201ENST00000458332 883 ntBASIC20.37■□□□□ 0.85
LRRC46Q96FV0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRC46Q96FV0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 CLDN5-201ENST00000403084 2357 ntBASIC20.36■□□□□ 0.85
LRRC46Q96FV0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 AC142381.2-201ENST00000566120 298 ntBASIC20.36■□□□□ 0.85
LRRC46Q96FV0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC46Q96FV0 AC010501.1-201ENST00000606270 1962 ntBASIC20.35■□□□□ 0.85
LRRC46Q96FV0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LRRC46Q96FV0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms