Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP9XQ93008 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 CDCA4P2-201ENST00000441182 718 ntBASIC20.28■□□□□ 0.84
USP9XQ93008 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
USP9XQ93008 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
USP9XQ93008 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.28■□□□□ 0.84
USP9XQ93008 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP9XQ93008 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
USP9XQ93008 AC241377.3-202ENST00000626088 1088 ntBASIC20.27■□□□□ 0.84
USP9XQ93008 AC241585.3-202ENST00000628937 1088 ntBASIC20.27■□□□□ 0.84
USP9XQ93008 AC245100.8-202ENST00000629247 1058 ntBASIC20.27■□□□□ 0.84
USP9XQ93008 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP9XQ93008 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP9XQ93008 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.27■□□□□ 0.83
USP9XQ93008 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.27■□□□□ 0.83
USP9XQ93008 KRT18P61-201ENST00000585825 1298 ntBASIC20.27■□□□□ 0.83
USP9XQ93008 AP004609.3-201ENST00000610705 1884 ntBASIC20.27■□□□□ 0.83
USP9XQ93008 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP9XQ93008 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.26■□□□□ 0.83
USP9XQ93008 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.26■□□□□ 0.83
USP9XQ93008 AC006015.1-201ENST00000429970 570 ntBASIC20.26■□□□□ 0.83
USP9XQ93008 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP9XQ93008 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
USP9XQ93008 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.25■□□□□ 0.83
USP9XQ93008 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 AC080038.1-201ENST00000611274 1154 ntBASIC20.25■□□□□ 0.83
USP9XQ93008 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.25■□□□□ 0.83
USP9XQ93008 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
USP9XQ93008 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.25■□□□□ 0.83
USP9XQ93008 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP9XQ93008 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP9XQ93008 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP9XQ93008 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP9XQ93008 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP9XQ93008 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.24■□□□□ 0.83
USP9XQ93008 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP9XQ93008 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP9XQ93008 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP9XQ93008 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
USP9XQ93008 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.23■□□□□ 0.83
USP9XQ93008 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP9XQ93008 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.23■□□□□ 0.83
USP9XQ93008 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.23■□□□□ 0.83
USP9XQ93008 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP9XQ93008 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
USP9XQ93008 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.23■□□□□ 0.83
USP9XQ93008 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.23■□□□□ 0.83
USP9XQ93008 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP9XQ93008 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.22■□□□□ 0.83
USP9XQ93008 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.22■□□□□ 0.83
USP9XQ93008 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP9XQ93008 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP9XQ93008 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
USP9XQ93008 AC012414.1-201ENST00000556676 535 ntBASIC20.21■□□□□ 0.83
USP9XQ93008 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
USP9XQ93008 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.21■□□□□ 0.83
USP9XQ93008 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.21■□□□□ 0.83
USP9XQ93008 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP9XQ93008 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP9XQ93008 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP9XQ93008 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP9XQ93008 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP9XQ93008 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP9XQ93008 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP9XQ93008 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.2■□□□□ 0.82
USP9XQ93008 CROCCP5-201ENST00000436658 830 ntBASIC20.2■□□□□ 0.82
USP9XQ93008 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP9XQ93008 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.2■□□□□ 0.82
USP9XQ93008 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
USP9XQ93008 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.2■□□□□ 0.82
USP9XQ93008 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP9XQ93008 AC026185.1-201ENST00000445748 174 ntBASIC20.2■□□□□ 0.82
USP9XQ93008 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP9XQ93008 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.2■□□□□ 0.82
USP9XQ93008 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.2■□□□□ 0.82
USP9XQ93008 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
USP9XQ93008 MIR6084-201ENST00000622012 110 ntBASIC20.2■□□□□ 0.82
USP9XQ93008 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP9XQ93008 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.19■□□□□ 0.82
USP9XQ93008 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.19■□□□□ 0.82
USP9XQ93008 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP9XQ93008 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms