Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
TRUB1Q8WWH5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB1Q8WWH5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 MIR3648-2-201ENST00000581792 180 ntBASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 MIR3648-1-201ENST00000615959 180 ntBASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.91■□□□□ 0.94
TRUB1Q8WWH5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 AC060814.1-201ENST00000554326 538 ntBASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRUB1Q8WWH5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRUB1Q8WWH5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRUB1Q8WWH5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRUB1Q8WWH5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRUB1Q8WWH5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 RP9P-202ENST00000450133 1212 ntBASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRUB1Q8WWH5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 DUSP8P3-201ENST00000399571 1760 ntBASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB1Q8WWH5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 AC092296.2-201ENST00000589470 999 ntBASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.86■□□□□ 0.93
TRUB1Q8WWH5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
TRUB1Q8WWH5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 ANOS2P-203ENST00000472227 1816 ntBASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB1Q8WWH5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms