Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 AC034268.1-201ENST00000441047 882 ntBASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
U2AF1L4Q8WU68 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 AC011298.3-201ENST00000615796 283 ntBASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
U2AF1L4Q8WU68 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.16■■□□□ 1.78
U2AF1L4Q8WU68 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.16■■□□□ 1.78
U2AF1L4Q8WU68 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.16■■□□□ 1.78
U2AF1L4Q8WU68 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.16■■□□□ 1.78
U2AF1L4Q8WU68 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
U2AF1L4Q8WU68 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
U2AF1L4Q8WU68 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 AC005703.6-201ENST00000623265 1329 ntBASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
U2AF1L4Q8WU68 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 AC092437.1-201ENST00000624794 1048 ntBASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
U2AF1L4Q8WU68 AC020928.2-201ENST00000588717 2197 ntBASIC26.14■■□□□ 1.77
U2AF1L4Q8WU68 AC135731.1-201ENST00000569415 2548 ntBASIC26.14■■□□□ 1.77
U2AF1L4Q8WU68 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
U2AF1L4Q8WU68 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
U2AF1L4Q8WU68 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 AL138724.1-201ENST00000606771 1088 ntBASIC26.13■■□□□ 1.77
U2AF1L4Q8WU68 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 ID1-201ENST00000376105 1233 ntBASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 KRT18P5-201ENST00000436075 1291 ntBASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 SLC47A1P1-202ENST00000449666 945 ntBASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 AC099791.2-201ENST00000605725 427 ntBASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
U2AF1L4Q8WU68 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
U2AF1L4Q8WU68 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.1■■□□□ 1.77
U2AF1L4Q8WU68 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms