Protein–RNA interactions for Protein: Q8TD19

NEK9, Serine/threonine-protein kinase Nek9, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9Q8TD19 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.74■■□□□ 1.71
NEK9Q8TD19 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
NEK9Q8TD19 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.74■■□□□ 1.71
NEK9Q8TD19 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NEK9Q8TD19 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NEK9Q8TD19 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.73■■□□□ 1.71
NEK9Q8TD19 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.73■■□□□ 1.71
NEK9Q8TD19 LINC00543-201ENST00000567234 1845 ntBASIC25.72■■□□□ 1.71
NEK9Q8TD19 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.72■■□□□ 1.71
NEK9Q8TD19 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NEK9Q8TD19 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.72■■□□□ 1.71
NEK9Q8TD19 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.72■■□□□ 1.71
NEK9Q8TD19 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NEK9Q8TD19 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NEK9Q8TD19 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
NEK9Q8TD19 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
NEK9Q8TD19 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NEK9Q8TD19 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK9Q8TD19 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.71■■□□□ 1.71
NEK9Q8TD19 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NEK9Q8TD19 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.71■■□□□ 1.71
NEK9Q8TD19 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.71■■□□□ 1.71
NEK9Q8TD19 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK9Q8TD19 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK9Q8TD19 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NEK9Q8TD19 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
NEK9Q8TD19 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NEK9Q8TD19 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NEK9Q8TD19 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NEK9Q8TD19 AC131281.2-201ENST00000520478 145 ntBASIC25.69■■□□□ 1.7
NEK9Q8TD19 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.69■■□□□ 1.7
NEK9Q8TD19 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
NEK9Q8TD19 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.69■■□□□ 1.7
NEK9Q8TD19 LINC01124-201ENST00000409786 2117 ntBASIC25.69■■□□□ 1.7
NEK9Q8TD19 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NEK9Q8TD19 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
NEK9Q8TD19 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
NEK9Q8TD19 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NEK9Q8TD19 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NEK9Q8TD19 MIR6724-1-201ENST00000616420 92 ntBASIC25.68■■□□□ 1.7
NEK9Q8TD19 MIR6724-2-201ENST00000616483 92 ntBASIC25.68■■□□□ 1.7
NEK9Q8TD19 MIR6724-4-201ENST00000617390 92 ntBASIC25.68■■□□□ 1.7
NEK9Q8TD19 MIR6724-3-201ENST00000622482 92 ntBASIC25.68■■□□□ 1.7
NEK9Q8TD19 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NEK9Q8TD19 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK9Q8TD19 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK9Q8TD19 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK9Q8TD19 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK9Q8TD19 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK9Q8TD19 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
NEK9Q8TD19 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NEK9Q8TD19 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
NEK9Q8TD19 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
NEK9Q8TD19 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK9Q8TD19 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK9Q8TD19 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.66■■□□□ 1.7
NEK9Q8TD19 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK9Q8TD19 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK9Q8TD19 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.66■■□□□ 1.7
NEK9Q8TD19 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK9Q8TD19 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.65■■□□□ 1.7
NEK9Q8TD19 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
NEK9Q8TD19 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK9Q8TD19 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NEK9Q8TD19 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK9Q8TD19 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.65■■□□□ 1.7
NEK9Q8TD19 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK9Q8TD19 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NEK9Q8TD19 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NEK9Q8TD19 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NEK9Q8TD19 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.64■■□□□ 1.7
NEK9Q8TD19 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
NEK9Q8TD19 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.64■■□□□ 1.7
NEK9Q8TD19 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
NEK9Q8TD19 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.64■■□□□ 1.69
NEK9Q8TD19 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.69
NEK9Q8TD19 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NEK9Q8TD19 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NEK9Q8TD19 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 AC110285.6-201ENST00000617652 491 ntBASIC25.63■■□□□ 1.69
NEK9Q8TD19 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NEK9Q8TD19 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NEK9Q8TD19 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NEK9Q8TD19 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.62■■□□□ 1.69
NEK9Q8TD19 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.62■■□□□ 1.69
NEK9Q8TD19 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
NEK9Q8TD19 AL136116.3-201ENST00000402907 1138 ntBASIC25.62■■□□□ 1.69
NEK9Q8TD19 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NEK9Q8TD19 AC005837.3-201ENST00000612163 286 ntBASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms