Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH19Q8TAB3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH19Q8TAB3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH19Q8TAB3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDH19Q8TAB3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDH19Q8TAB3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH19Q8TAB3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH19Q8TAB3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDH19Q8TAB3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH19Q8TAB3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 AL031848.2-201ENST00000607670 837 ntBASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH19Q8TAB3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH19Q8TAB3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.64■■□□□ 1.38
PCDH19Q8TAB3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH19Q8TAB3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
PCDH19Q8TAB3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDH19Q8TAB3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDH19Q8TAB3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PCDH19Q8TAB3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH19Q8TAB3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH19Q8TAB3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH19Q8TAB3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH19Q8TAB3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDH19Q8TAB3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH19Q8TAB3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDH19Q8TAB3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDH19Q8TAB3 AC137630.3-201ENST00000607245 391 ntBASIC23.61■■□□□ 1.37
PCDH19Q8TAB3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH19Q8TAB3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH19Q8TAB3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 ALDH1A3-203ENST00000557963 1670 ntBASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 AC004448.1-201ENST00000458332 883 ntBASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH19Q8TAB3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH19Q8TAB3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH19Q8TAB3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH19Q8TAB3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH19Q8TAB3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms