Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFWD2Q8NHY2 GUSBP5-202ENST00000510805 1989 ntBASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFWD2Q8NHY2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.55■■□□□ 1.2
RFWD2Q8NHY2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 AC092068.2-201ENST00000590491 1708 ntBASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFWD2Q8NHY2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RFWD2Q8NHY2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFWD2Q8NHY2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.52■■□□□ 1.2
RFWD2Q8NHY2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RFWD2Q8NHY2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.52■■□□□ 1.2
RFWD2Q8NHY2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFWD2Q8NHY2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFWD2Q8NHY2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 SMPD5-203ENST00000639008 1464 ntBASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFWD2Q8NHY2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFWD2Q8NHY2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFWD2Q8NHY2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RFWD2Q8NHY2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFWD2Q8NHY2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RFWD2Q8NHY2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFWD2Q8NHY2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFWD2Q8NHY2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms