Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EXD3Q8N9H8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EXD3Q8N9H8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
EXD3Q8N9H8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
EXD3Q8N9H8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EXD3Q8N9H8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.54■■□□□ 1.04
EXD3Q8N9H8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 DUX4L19-201ENST00000557448 1267 ntBASIC21.53■■□□□ 1.04
EXD3Q8N9H8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.53■■□□□ 1.04
EXD3Q8N9H8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EXD3Q8N9H8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.52■■□□□ 1.04
EXD3Q8N9H8 MIR4767-201ENST00000582827 78 ntBASIC21.52■■□□□ 1.04
EXD3Q8N9H8 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.52■■□□□ 1.04
EXD3Q8N9H8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
EXD3Q8N9H8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
EXD3Q8N9H8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
EXD3Q8N9H8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.51■■□□□ 1.03
EXD3Q8N9H8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 RASA4CP-201ENST00000424092 1398 ntBASIC21.5■■□□□ 1.03
EXD3Q8N9H8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.5■■□□□ 1.03
EXD3Q8N9H8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EXD3Q8N9H8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EXD3Q8N9H8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.49■■□□□ 1.03
EXD3Q8N9H8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.49■■□□□ 1.03
EXD3Q8N9H8 AC142381.3-201ENST00000568208 1670 ntBASIC21.49■■□□□ 1.03
EXD3Q8N9H8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
EXD3Q8N9H8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EXD3Q8N9H8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.48■■□□□ 1.03
EXD3Q8N9H8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXD3Q8N9H8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXD3Q8N9H8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
EXD3Q8N9H8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.48■■□□□ 1.03
EXD3Q8N9H8 SYT6-210ENST00000641643 1587 ntBASIC21.48■■□□□ 1.03
EXD3Q8N9H8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 IRS3P-201ENST00000223076 1006 ntBASIC21.47■■□□□ 1.03
EXD3Q8N9H8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 IKBKGP1-201ENST00000612193 1073 ntBASIC21.47■■□□□ 1.03
EXD3Q8N9H8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXD3Q8N9H8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
EXD3Q8N9H8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EXD3Q8N9H8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXD3Q8N9H8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
EXD3Q8N9H8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXD3Q8N9H8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.45■■□□□ 1.02
EXD3Q8N9H8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.45■■□□□ 1.02
EXD3Q8N9H8 AC093323.1-202ENST00000635031 2045 ntBASIC21.45■■□□□ 1.02
EXD3Q8N9H8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 AC022211.4-201ENST00000625094 2161 ntBASIC21.44■■□□□ 1.02
EXD3Q8N9H8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 FOXO3B-201ENST00000395675 1928 ntBASIC21.44■■□□□ 1.02
EXD3Q8N9H8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EXD3Q8N9H8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms