Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.23■■□□□ 1.31
PGBD3Q8N328 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
PGBD3Q8N328 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PGBD3Q8N328 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGBD3Q8N328 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.22■■□□□ 1.31
PGBD3Q8N328 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.22■■□□□ 1.31
PGBD3Q8N328 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGBD3Q8N328 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PGBD3Q8N328 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGBD3Q8N328 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.22■■□□□ 1.31
PGBD3Q8N328 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGBD3Q8N328 SYT6-210ENST00000641643 1587 ntBASIC23.22■■□□□ 1.31
PGBD3Q8N328 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGBD3Q8N328 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD3Q8N328 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PGBD3Q8N328 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD3Q8N328 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD3Q8N328 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD3Q8N328 AC092171.4-201ENST00000609130 632 ntBASIC23.21■■□□□ 1.31
PGBD3Q8N328 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PGBD3Q8N328 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD3Q8N328 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD3Q8N328 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.2■■□□□ 1.3
PGBD3Q8N328 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.2■■□□□ 1.3
PGBD3Q8N328 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.2■■□□□ 1.3
PGBD3Q8N328 AC105265.2-201ENST00000467189 838 ntBASIC23.2■■□□□ 1.3
PGBD3Q8N328 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PGBD3Q8N328 AC092666.2-201ENST00000613287 246 ntBASIC23.2■■□□□ 1.3
PGBD3Q8N328 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PGBD3Q8N328 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PGBD3Q8N328 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGBD3Q8N328 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PGBD3Q8N328 AF213884.3-201ENST00000563833 479 ntBASIC23.19■■□□□ 1.3
PGBD3Q8N328 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.18■■□□□ 1.3
PGBD3Q8N328 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PGBD3Q8N328 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGBD3Q8N328 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGBD3Q8N328 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PGBD3Q8N328 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD3Q8N328 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD3Q8N328 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD3Q8N328 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PGBD3Q8N328 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.17■■□□□ 1.3
PGBD3Q8N328 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD3Q8N328 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD3Q8N328 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD3Q8N328 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD3Q8N328 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 AL136967.2-201ENST00000623968 743 ntBASIC23.16■■□□□ 1.3
PGBD3Q8N328 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD3Q8N328 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.16■■□□□ 1.3
PGBD3Q8N328 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD3Q8N328 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD3Q8N328 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.15■■□□□ 1.3
PGBD3Q8N328 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PGBD3Q8N328 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGBD3Q8N328 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGBD3Q8N328 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGBD3Q8N328 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.15■■□□□ 1.3
PGBD3Q8N328 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.15■■□□□ 1.3
PGBD3Q8N328 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.15■■□□□ 1.3
PGBD3Q8N328 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.15■■□□□ 1.3
PGBD3Q8N328 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGBD3Q8N328 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PGBD3Q8N328 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PGBD3Q8N328 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PGBD3Q8N328 AC131274.2-201ENST00000580697 1507 ntBASIC23.14■■□□□ 1.3
PGBD3Q8N328 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
PGBD3Q8N328 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.14■■□□□ 1.29
PGBD3Q8N328 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PGBD3Q8N328 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PGBD3Q8N328 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.14■■□□□ 1.29
PGBD3Q8N328 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.14■■□□□ 1.29
PGBD3Q8N328 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.13■■□□□ 1.29
PGBD3Q8N328 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.13■■□□□ 1.29
PGBD3Q8N328 AC099791.2-201ENST00000605725 427 ntBASIC23.13■■□□□ 1.29
PGBD3Q8N328 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.13■■□□□ 1.29
PGBD3Q8N328 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PGBD3Q8N328 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD3Q8N328 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.13■■□□□ 1.29
PGBD3Q8N328 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms