Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.52■■□□□ 1.68
DHX40Q8IX18 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
DHX40Q8IX18 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
DHX40Q8IX18 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DHX40Q8IX18 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.51■■□□□ 1.67
DHX40Q8IX18 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
DHX40Q8IX18 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
DHX40Q8IX18 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DHX40Q8IX18 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DHX40Q8IX18 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DHX40Q8IX18 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DHX40Q8IX18 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.5■■□□□ 1.67
DHX40Q8IX18 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DHX40Q8IX18 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DHX40Q8IX18 AC090877.2-201ENST00000558441 1738 ntBASIC25.49■■□□□ 1.67
DHX40Q8IX18 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.49■■□□□ 1.67
DHX40Q8IX18 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DHX40Q8IX18 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
DHX40Q8IX18 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
DHX40Q8IX18 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.48■■□□□ 1.67
DHX40Q8IX18 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
DHX40Q8IX18 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
DHX40Q8IX18 AC009831.1-201ENST00000580420 1582 ntBASIC25.48■■□□□ 1.67
DHX40Q8IX18 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.47■■□□□ 1.67
DHX40Q8IX18 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DHX40Q8IX18 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.47■■□□□ 1.67
DHX40Q8IX18 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
DHX40Q8IX18 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
DHX40Q8IX18 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
DHX40Q8IX18 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
DHX40Q8IX18 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
DHX40Q8IX18 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DHX40Q8IX18 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
DHX40Q8IX18 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
DHX40Q8IX18 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
DHX40Q8IX18 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
DHX40Q8IX18 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DHX40Q8IX18 LINC00565-201ENST00000562710 2331 ntBASIC25.45■■□□□ 1.66
DHX40Q8IX18 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DHX40Q8IX18 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DHX40Q8IX18 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DHX40Q8IX18 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
DHX40Q8IX18 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.45■■□□□ 1.66
DHX40Q8IX18 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.44■■□□□ 1.66
DHX40Q8IX18 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
DHX40Q8IX18 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.44■■□□□ 1.66
DHX40Q8IX18 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DHX40Q8IX18 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
DHX40Q8IX18 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DHX40Q8IX18 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
DHX40Q8IX18 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DHX40Q8IX18 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.43■■□□□ 1.66
DHX40Q8IX18 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DHX40Q8IX18 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
DHX40Q8IX18 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.43■■□□□ 1.66
DHX40Q8IX18 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
DHX40Q8IX18 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DHX40Q8IX18 RPS2P7-201ENST00000447334 885 ntBASIC25.42■■□□□ 1.66
DHX40Q8IX18 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DHX40Q8IX18 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
DHX40Q8IX18 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.41■■□□□ 1.66
DHX40Q8IX18 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.41■■□□□ 1.66
DHX40Q8IX18 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
DHX40Q8IX18 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
DHX40Q8IX18 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
DHX40Q8IX18 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DHX40Q8IX18 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
DHX40Q8IX18 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DHX40Q8IX18 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
DHX40Q8IX18 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.4■■□□□ 1.66
DHX40Q8IX18 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DHX40Q8IX18 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.4■■□□□ 1.66
DHX40Q8IX18 AL161729.1-201ENST00000604104 1402 ntBASIC25.39■■□□□ 1.66
DHX40Q8IX18 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms