Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 RARRES2P6-201ENST00000567333 442 ntBASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
SFTPA1Q8IWL2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 AP001330.3-201ENST00000520123 633 ntBASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 MIR4767-201ENST00000582827 78 ntBASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SFTPA1Q8IWL2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 HLA-L-211ENST00000482052 1765 ntBASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 AC026271.2-201ENST00000428091 497 ntBASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 AC105265.2-201ENST00000467189 838 ntBASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.33■■□□□ 1.33
SFTPA1Q8IWL2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 SYT6-210ENST00000641643 1587 ntBASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 MIR939-201ENST00000401314 82 ntBASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SFTPA1Q8IWL2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
SFTPA1Q8IWL2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.31■■□□□ 1.32
SFTPA1Q8IWL2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SFTPA1Q8IWL2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.31■■□□□ 1.32
SFTPA1Q8IWL2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.31■■□□□ 1.32
SFTPA1Q8IWL2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.3■■□□□ 1.32
SFTPA1Q8IWL2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SFTPA1Q8IWL2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SFTPA1Q8IWL2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.29■■□□□ 1.32
SFTPA1Q8IWL2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SFTPA1Q8IWL2 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.29■■□□□ 1.32
SFTPA1Q8IWL2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SFTPA1Q8IWL2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 AC006455.2-201ENST00000429931 906 ntBASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 DUX4L19-201ENST00000557448 1267 ntBASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SFTPA1Q8IWL2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.27■■□□□ 1.32
SFTPA1Q8IWL2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SFTPA1Q8IWL2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SFTPA1Q8IWL2 AC135731.1-201ENST00000569415 2548 ntBASIC23.27■■□□□ 1.32
SFTPA1Q8IWL2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SFTPA1Q8IWL2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
SFTPA1Q8IWL2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 C17orf82-201ENST00000623772 1530 ntBASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.26■■□□□ 1.31
SFTPA1Q8IWL2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SFTPA1Q8IWL2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SFTPA1Q8IWL2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.25■■□□□ 1.31
SFTPA1Q8IWL2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms