Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR6821-201ENST00000617625 74 ntBASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 AC241377.3-202ENST00000626088 1088 ntBASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 AC241585.3-202ENST00000628937 1088 ntBASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 AC245100.8-202ENST00000629247 1058 ntBASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 C17orf82-201ENST00000623772 1530 ntBASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NPAS4Q8IUM7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPAS4Q8IUM7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
NPAS4Q8IUM7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
NPAS4Q8IUM7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.79■■□□□ 1.56
NPAS4Q8IUM7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.79■■□□□ 1.56
NPAS4Q8IUM7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.79■■□□□ 1.56
NPAS4Q8IUM7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPAS4Q8IUM7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 AC008764.7-201ENST00000593779 1081 ntBASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
NPAS4Q8IUM7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
NPAS4Q8IUM7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NPAS4Q8IUM7 AC097381.1-201ENST00000429019 1296 ntBASIC24.76■■□□□ 1.55
NPAS4Q8IUM7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.76■■□□□ 1.55
NPAS4Q8IUM7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
NPAS4Q8IUM7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NPAS4Q8IUM7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 AC136469.2-201ENST00000623944 1028 ntBASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NPAS4Q8IUM7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 AC099791.1-201ENST00000416440 715 ntBASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
NPAS4Q8IUM7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NPAS4Q8IUM7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NPAS4Q8IUM7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
NPAS4Q8IUM7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NPAS4Q8IUM7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
NPAS4Q8IUM7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.73■■□□□ 1.55
NPAS4Q8IUM7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
NPAS4Q8IUM7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 IRS3P-201ENST00000223076 1006 ntBASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 AC006455.2-201ENST00000429931 906 ntBASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPAS4Q8IUM7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
NPAS4Q8IUM7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
NPAS4Q8IUM7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
NPAS4Q8IUM7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 AC087623.3-201ENST00000607047 1098 ntBASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 AC009086.3-201ENST00000623486 1008 ntBASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NPAS4Q8IUM7 AC091060.1-201ENST00000623524 1766 ntBASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms