Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 TSPY9P-201ENST00000440215 945 ntBASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 TSPY11P-201ENST00000442607 1045 ntBASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM90A1Q86YD7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM90A1Q86YD7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 UNC93B8-201ENST00000511903 705 ntBASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM90A1Q86YD7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FAM90A1Q86YD7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
FAM90A1Q86YD7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 ALDH1A3-203ENST00000557963 1670 ntBASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM90A1Q86YD7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 MTDHP2-201ENST00000601468 714 ntBASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM90A1Q86YD7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM90A1Q86YD7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms