Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC096887.2-201ENST00000623443 1957 ntBASIC29.26■■■□□ 2.27
COL23A1Q86Y22 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL23A1Q86Y22 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.25■■■□□ 2.27
COL23A1Q86Y22 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COL23A1Q86Y22 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL23A1Q86Y22 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL23A1Q86Y22 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL23A1Q86Y22 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL23A1Q86Y22 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL23A1Q86Y22 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL23A1Q86Y22 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.24■■■□□ 2.27
COL23A1Q86Y22 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
COL23A1Q86Y22 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.23■■■□□ 2.27
COL23A1Q86Y22 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL23A1Q86Y22 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.21■■■□□ 2.27
COL23A1Q86Y22 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
COL23A1Q86Y22 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.21■■■□□ 2.27
COL23A1Q86Y22 AC126544.1-201ENST00000580842 1059 ntBASIC29.21■■■□□ 2.27
COL23A1Q86Y22 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.21■■■□□ 2.27
COL23A1Q86Y22 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL23A1Q86Y22 TSPY26P-201ENST00000476365 1326 ntBASIC29.2■■■□□ 2.27
COL23A1Q86Y22 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.2■■■□□ 2.27
COL23A1Q86Y22 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 AC027612.3-201ENST00000413684 1047 ntBASIC29.2■■■□□ 2.26
COL23A1Q86Y22 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
COL23A1Q86Y22 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL23A1Q86Y22 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
COL23A1Q86Y22 HLA-L-209ENST00000420110 1011 ntBASIC29.19■■■□□ 2.26
COL23A1Q86Y22 AC123595.1-201ENST00000440769 1046 ntBASIC29.19■■■□□ 2.26
COL23A1Q86Y22 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL23A1Q86Y22 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL23A1Q86Y22 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.18■■■□□ 2.26
COL23A1Q86Y22 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL23A1Q86Y22 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.18■■■□□ 2.26
COL23A1Q86Y22 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.18■■■□□ 2.26
COL23A1Q86Y22 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
COL23A1Q86Y22 AC009086.3-201ENST00000623486 1008 ntBASIC29.18■■■□□ 2.26
COL23A1Q86Y22 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.18■■■□□ 2.26
COL23A1Q86Y22 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
COL23A1Q86Y22 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.17■■■□□ 2.26
COL23A1Q86Y22 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL23A1Q86Y22 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
COL23A1Q86Y22 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL23A1Q86Y22 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.16■■■□□ 2.26
COL23A1Q86Y22 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.16■■■□□ 2.26
COL23A1Q86Y22 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.16■■■□□ 2.26
COL23A1Q86Y22 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 MIR6084-201ENST00000622012 110 ntBASIC29.15■■■□□ 2.26
COL23A1Q86Y22 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL23A1Q86Y22 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 AL358852.1-201ENST00000623174 1268 ntBASIC29.14■■■□□ 2.26
COL23A1Q86Y22 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
COL23A1Q86Y22 ERN1-208ENST00000606895 2068 ntBASIC29.13■■■□□ 2.25
COL23A1Q86Y22 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL23A1Q86Y22 CCDC92B-201ENST00000575506 885 ntBASIC29.13■■■□□ 2.25
COL23A1Q86Y22 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.13■■■□□ 2.25
COL23A1Q86Y22 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL23A1Q86Y22 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL23A1Q86Y22 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL23A1Q86Y22 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.12■■■□□ 2.25
COL23A1Q86Y22 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL23A1Q86Y22 NTF6G-201ENST00000591094 616 ntBASIC29.12■■■□□ 2.25
COL23A1Q86Y22 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL23A1Q86Y22 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL23A1Q86Y22 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL23A1Q86Y22 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms