Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.25■■■□□ 2.11
TMC4Q7Z404 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.25■■■□□ 2.11
TMC4Q7Z404 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC4Q7Z404 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
TMC4Q7Z404 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC4Q7Z404 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC4Q7Z404 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.24■■■□□ 2.11
TMC4Q7Z404 AL161729.1-201ENST00000604104 1402 ntBASIC28.24■■■□□ 2.11
TMC4Q7Z404 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.23■■■□□ 2.11
TMC4Q7Z404 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.23■■■□□ 2.11
TMC4Q7Z404 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMC4Q7Z404 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.23■■■□□ 2.11
TMC4Q7Z404 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TMC4Q7Z404 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TMC4Q7Z404 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TMC4Q7Z404 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.22■■■□□ 2.11
TMC4Q7Z404 DUSP8P4-201ENST00000399538 1761 ntBASIC28.22■■■□□ 2.11
TMC4Q7Z404 IRS3P-201ENST00000223076 1006 ntBASIC28.22■■■□□ 2.11
TMC4Q7Z404 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TMC4Q7Z404 AC008764.7-201ENST00000593779 1081 ntBASIC28.22■■■□□ 2.11
TMC4Q7Z404 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.22■■■□□ 2.11
TMC4Q7Z404 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMC4Q7Z404 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.21■■■□□ 2.11
TMC4Q7Z404 AC099791.1-201ENST00000416440 715 ntBASIC28.21■■■□□ 2.11
TMC4Q7Z404 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.21■■■□□ 2.11
TMC4Q7Z404 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.21■■■□□ 2.11
TMC4Q7Z404 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TMC4Q7Z404 AL121749.1-202ENST00000609313 2153 ntBASIC28.21■■■□□ 2.11
TMC4Q7Z404 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
TMC4Q7Z404 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TMC4Q7Z404 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
TMC4Q7Z404 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
TMC4Q7Z404 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TMC4Q7Z404 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TMC4Q7Z404 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.2■■■□□ 2.1
TMC4Q7Z404 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TMC4Q7Z404 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TMC4Q7Z404 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
TMC4Q7Z404 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TMC4Q7Z404 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TMC4Q7Z404 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.19■■■□□ 2.1
TMC4Q7Z404 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.19■■■□□ 2.1
TMC4Q7Z404 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.19■■■□□ 2.1
TMC4Q7Z404 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TMC4Q7Z404 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.19■■■□□ 2.1
TMC4Q7Z404 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
TMC4Q7Z404 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.19■■■□□ 2.1
TMC4Q7Z404 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.18■■■□□ 2.1
TMC4Q7Z404 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TMC4Q7Z404 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TMC4Q7Z404 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.17■■■□□ 2.1
TMC4Q7Z404 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TMC4Q7Z404 AC233992.3-201ENST00000607491 485 ntBASIC28.17■■■□□ 2.1
TMC4Q7Z404 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TMC4Q7Z404 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.17■■■□□ 2.1
TMC4Q7Z404 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
TMC4Q7Z404 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMC4Q7Z404 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TMC4Q7Z404 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMC4Q7Z404 BX842568.3-201ENST00000418104 571 ntBASIC28.16■■■□□ 2.1
TMC4Q7Z404 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
TMC4Q7Z404 AC087623.3-201ENST00000607047 1098 ntBASIC28.16■■■□□ 2.1
TMC4Q7Z404 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMC4Q7Z404 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMC4Q7Z404 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TMC4Q7Z404 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
TMC4Q7Z404 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TMC4Q7Z404 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMC4Q7Z404 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
TMC4Q7Z404 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TMC4Q7Z404 AC009086.3-201ENST00000623486 1008 ntBASIC28.15■■■□□ 2.1
TMC4Q7Z404 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMC4Q7Z404 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TMC4Q7Z404 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
TMC4Q7Z404 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.14■■■□□ 2.1
TMC4Q7Z404 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.14■■■□□ 2.1
TMC4Q7Z404 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.14■■■□□ 2.1
TMC4Q7Z404 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.14■■■□□ 2.09
TMC4Q7Z404 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
TMC4Q7Z404 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMC4Q7Z404 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
TMC4Q7Z404 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.13■■■□□ 2.09
TMC4Q7Z404 AC006455.2-201ENST00000429931 906 ntBASIC28.13■■■□□ 2.09
TMC4Q7Z404 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TMC4Q7Z404 MIR3181-201ENST00000578512 73 ntBASIC28.13■■■□□ 2.09
TMC4Q7Z404 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
TMC4Q7Z404 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TMC4Q7Z404 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.12■■■□□ 2.09
TMC4Q7Z404 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.12■■■□□ 2.09
TMC4Q7Z404 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TMC4Q7Z404 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.12■■■□□ 2.09
TMC4Q7Z404 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms