Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPUSD3Q6P087 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPUSD3Q6P087 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 AL136967.2-201ENST00000623968 743 ntBASIC20.93■□□□□ 0.94
RPUSD3Q6P087 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPUSD3Q6P087 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.92■□□□□ 0.94
RPUSD3Q6P087 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPUSD3Q6P087 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPUSD3Q6P087 AC131274.2-201ENST00000580697 1507 ntBASIC20.92■□□□□ 0.94
RPUSD3Q6P087 SYT6-210ENST00000641643 1587 ntBASIC20.92■□□□□ 0.94
RPUSD3Q6P087 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPUSD3Q6P087 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPUSD3Q6P087 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPUSD3Q6P087 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.91■□□□□ 0.94
RPUSD3Q6P087 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPUSD3Q6P087 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 AC026271.2-201ENST00000428091 497 ntBASIC20.9■□□□□ 0.94
RPUSD3Q6P087 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 AC020928.2-201ENST00000588717 2197 ntBASIC20.9■□□□□ 0.94
RPUSD3Q6P087 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 DUSP8P4-201ENST00000399538 1761 ntBASIC20.9■□□□□ 0.94
RPUSD3Q6P087 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPUSD3Q6P087 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.89■□□□□ 0.94
RPUSD3Q6P087 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPUSD3Q6P087 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 MIR939-201ENST00000401314 82 ntBASIC20.89■□□□□ 0.93
RPUSD3Q6P087 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 MIR6089-201ENST00000616698 64 ntBASIC20.89■□□□□ 0.93
RPUSD3Q6P087 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPUSD3Q6P087 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 AC091305.1-201ENST00000479476 895 ntBASIC20.88■□□□□ 0.93
RPUSD3Q6P087 AF213884.3-201ENST00000563833 479 ntBASIC20.88■□□□□ 0.93
RPUSD3Q6P087 AL138724.1-201ENST00000606771 1088 ntBASIC20.88■□□□□ 0.93
RPUSD3Q6P087 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPUSD3Q6P087 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 AC105265.2-201ENST00000467189 838 ntBASIC20.87■□□□□ 0.93
RPUSD3Q6P087 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 AP001330.3-201ENST00000520123 633 ntBASIC20.87■□□□□ 0.93
RPUSD3Q6P087 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPUSD3Q6P087 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
RPUSD3Q6P087 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.86■□□□□ 0.93
RPUSD3Q6P087 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.86■□□□□ 0.93
RPUSD3Q6P087 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPUSD3Q6P087 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 AL022069.1-201ENST00000568025 1636 ntBASIC20.85■□□□□ 0.93
RPUSD3Q6P087 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPUSD3Q6P087 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPUSD3Q6P087 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.84■□□□□ 0.93
RPUSD3Q6P087 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPUSD3Q6P087 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.84■□□□□ 0.93
RPUSD3Q6P087 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms