Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDPF1Q6NVV7 AC141586.4-201ENST00000624558 1573 ntBASIC17.34■□□□□ 0.37
CDPF1Q6NVV7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDPF1Q6NVV7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDPF1Q6NVV7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.33■□□□□ 0.37
CDPF1Q6NVV7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.33■□□□□ 0.36
CDPF1Q6NVV7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.33■□□□□ 0.36
CDPF1Q6NVV7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDPF1Q6NVV7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDPF1Q6NVV7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDPF1Q6NVV7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 MIR3648-2-201ENST00000581792 180 ntBASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 MIR3648-1-201ENST00000615959 180 ntBASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDPF1Q6NVV7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 DUX4L11-201ENST00000611504 1267 ntBASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 DUX4L12-201ENST00000614593 1267 ntBASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 DUX4L14-201ENST00000621227 1267 ntBASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDPF1Q6NVV7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDPF1Q6NVV7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDPF1Q6NVV7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDPF1Q6NVV7 AC142472.1-201ENST00000612013 1741 ntBASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 AC016575.1-201ENST00000607026 382 ntBASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDPF1Q6NVV7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms