Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM35AQ53FP2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEM35AQ53FP2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEM35AQ53FP2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM35AQ53FP2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM35AQ53FP2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEM35AQ53FP2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM35AQ53FP2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.77■■□□□ 1.07
TMEM35AQ53FP2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM35AQ53FP2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM35AQ53FP2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 AC092028.1-203ENST00000608262 953 ntBASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM35AQ53FP2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 AC239859.2-201ENST00000444165 318 ntBASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 MIR6722-201ENST00000617286 78 ntBASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TMEM35AQ53FP2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 MIR4787-201ENST00000607364 84 ntBASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM35AQ53FP2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM35AQ53FP2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM35AQ53FP2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM35AQ53FP2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms