Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 TDA6YPR157W 1404 nt5.14□□□□□ -1.59
DNL4Q08387 UGA2YBR006W 1494 nt5.14□□□□□ -1.59
DNL4Q08387 SRG1SRG1 551 nt5.14□□□□□ -1.59
DNL4Q08387 SCS2YER120W 735 nt5.14□□□□□ -1.59
DNL4Q08387 YIF1YNL263C 945 nt5.14□□□□□ -1.59
DNL4Q08387 SFT2YBL102W 648 nt5.14□□□□□ -1.59
DNL4Q08387 ARO7YPR060C 771 nt5.14□□□□□ -1.59
DNL4Q08387 MRI1YPR118W 1236 nt5.14□□□□□ -1.59
DNL4Q08387 DOA1YKL213C 2148 nt5.14□□□□□ -1.59
DNL4Q08387 HRR25YPL204W 1485 nt5.13□□□□□ -1.59
DNL4Q08387 PAL1YDR348C 1500 nt5.13□□□□□ -1.59
DNL4Q08387 SRV2YNL138W 1581 nt5.13□□□□□ -1.59
DNL4Q08387 SED4YCR067C 3198 nt5.13□□□□□ -1.59
DNL4Q08387 PUS1YPL212C 1635 nt5.13□□□□□ -1.59
DNL4Q08387 ETT1YOR051C 1239 nt5.13□□□□□ -1.59
DNL4Q08387 EMP46YLR080W 1335 nt5.13□□□□□ -1.59
DNL4Q08387 YLH47YPR125W 1365 nt5.13□□□□□ -1.59
DNL4Q08387 NUP1YOR098C 3231 nt5.12□□□□□ -1.59
DNL4Q08387 CTS1YLR286C 1689 nt5.12□□□□□ -1.59
DNL4Q08387 PDR10YOR328W 4695 nt5.12□□□□□ -1.59
DNL4Q08387 DAK1YML070W 1755 nt5.12□□□□□ -1.59
DNL4Q08387 THI5YFL058W 1023 nt5.12□□□□□ -1.59
DNL4Q08387 THI12YNL332W 1023 nt5.12□□□□□ -1.59
DNL4Q08387 NPT1YOR209C 1290 nt5.12□□□□□ -1.59
DNL4Q08387 VHS2YIL135C 1311 nt5.12□□□□□ -1.59
DNL4Q08387 YMR111CYMR111C 1389 nt5.12□□□□□ -1.59
DNL4Q08387 FUM1YPL262W 1467 nt5.12□□□□□ -1.59
DNL4Q08387 URA7YBL039C 1740 nt5.11□□□□□ -1.59
DNL4Q08387 YLF2YHL014C 1218 nt5.11□□□□□ -1.59
DNL4Q08387 snR10snR10 245 nt5.11□□□□□ -1.59
DNL4Q08387 HAL1YPR005C 885 nt5.11□□□□□ -1.59
DNL4Q08387 RIM15YFL033C 5313 nt5.11□□□□□ -1.59
DNL4Q08387 ADE3YGR204W 2841 nt5.1□□□□□ -1.59
DNL4Q08387 STP4YDL048C 1473 nt5.1□□□□□ -1.59
DNL4Q08387 DNF2YDR093W 4839 nt5.1□□□□□ -1.59
DNL4Q08387 PEX7YDR142C 1128 nt5.1□□□□□ -1.59
DNL4Q08387 CAB1YDR531W 1104 nt5.1□□□□□ -1.59
DNL4Q08387 YEF1YEL041W 1488 nt5.1□□□□□ -1.59
DNL4Q08387 CCS1YMR038C 750 nt5.1□□□□□ -1.59
DNL4Q08387 YNL174WYNL174W 573 nt5.1□□□□□ -1.59
DNL4Q08387 PCA1YBR295W 3651 nt5.09□□□□□ -1.59
DNL4Q08387 RPL34AYER056C-A 366 nt5.09□□□□□ -1.59
DNL4Q08387 APS1YLR170C 471 nt5.09□□□□□ -1.59
DNL4Q08387 DCI1YOR180C 816 nt5.09□□□□□ -1.59
DNL4Q08387 YPL191CYPL191C 1083 nt5.09□□□□□ -1.59
DNL4Q08387 UBA3YPR066W 900 nt5.09□□□□□ -1.59
DNL4Q08387 ARN1YHL040C 1884 nt5.09□□□□□ -1.6
DNL4Q08387 MMT2YPL224C 1455 nt5.08□□□□□ -1.6
DNL4Q08387 ASA1YPR085C 1332 nt5.08□□□□□ -1.6
DNL4Q08387 SAF1YBR280C 1914 nt5.08□□□□□ -1.6
DNL4Q08387 HSP31YDR533C 714 nt5.08□□□□□ -1.6
DNL4Q08387 YKL107WYKL107W 930 nt5.08□□□□□ -1.6
DNL4Q08387 RCK1YGL158W 1539 nt5.07□□□□□ -1.6
DNL4Q08387 BUD7YOR299W 2241 nt5.07□□□□□ -1.6
DNL4Q08387 PDE1YGL248W 1110 nt5.07□□□□□ -1.6
DNL4Q08387 YLR346CYLR346C 306 nt5.07□□□□□ -1.6
DNL4Q08387 MDG1YNL173C 1101 nt5.07□□□□□ -1.6
DNL4Q08387 TGS1YPL157W 948 nt5.07□□□□□ -1.6
DNL4Q08387 ARB1YER036C 1833 nt5.07□□□□□ -1.6
DNL4Q08387 PUT1YLR142W 1431 nt5.06□□□□□ -1.6
DNL4Q08387 FHL1YPR104C 2811 nt5.06□□□□□ -1.6
DNL4Q08387 YJR124CYJR124C 1347 nt5.06□□□□□ -1.6
DNL4Q08387 RML2YEL050C 1182 nt5.06□□□□□ -1.6
DNL4Q08387 KRE9YJL174W 831 nt5.06□□□□□ -1.6
DNL4Q08387 CDC21YOR074C 915 nt5.06□□□□□ -1.6
DNL4Q08387 GIP2YER054C 1647 nt5.05□□□□□ -1.6
DNL4Q08387 MSE1YOL033W 1611 nt5.05□□□□□ -1.6
DNL4Q08387 RPN6YDL097C 1305 nt5.05□□□□□ -1.6
DNL4Q08387 CUE2YKL090W 1332 nt5.05□□□□□ -1.6
DNL4Q08387 TFC7YOR110W 1308 nt5.05□□□□□ -1.6
DNL4Q08387 RPL12AYEL054C 498 nt5.05□□□□□ -1.6
DNL4Q08387 YGR016WYGR016W 573 nt5.05□□□□□ -1.6
DNL4Q08387 COX18YGR062C 951 nt5.05□□□□□ -1.6
DNL4Q08387 PCT1YGR202C 1275 nt5.05□□□□□ -1.6
DNL4Q08387 YNL067W-AYNL067W-A 147 nt5.05□□□□□ -1.6
DNL4Q08387 YCL021W-AYCL021W-A 378 nt5.05□□□□□ -1.6
DNL4Q08387 SWI3YJL176C 2478 nt5.05□□□□□ -1.6
DNL4Q08387 APL6YGR261C 2430 nt5.05□□□□□ -1.6
DNL4Q08387 VHC1YBR235W 3363 nt5.04□□□□□ -1.6
DNL4Q08387 GTO1YGR154C 1071 nt5.04□□□□□ -1.6
DNL4Q08387 YGR266WYGR266W 2106 nt5.04□□□□□ -1.6
DNL4Q08387 YHR140WYHR140W 720 nt5.04□□□□□ -1.6
DNL4Q08387 AIF1YNR074C 1137 nt5.04□□□□□ -1.6
DNL4Q08387 snR19snR19 568 nt5.04□□□□□ -1.6
DNL4Q08387 SLT2YHR030C 1455 nt5.04□□□□□ -1.6
DNL4Q08387 FAP1YNL023C 2898 nt5.04□□□□□ -1.6
DNL4Q08387 LPL1YOR059C 1353 nt5.04□□□□□ -1.6
DNL4Q08387 GDE1YPL110C 3672 nt5.03□□□□□ -1.6
DNL4Q08387 PTR2YKR093W 1806 nt5.03□□□□□ -1.6
DNL4Q08387 URA3YEL021W 804 nt5.03□□□□□ -1.6
DNL4Q08387 TOM20YGR082W 552 nt5.03□□□□□ -1.6
DNL4Q08387 CTR3YLR411W 726 nt5.03□□□□□ -1.6
DNL4Q08387 STE7YDL159W 1548 nt5.02□□□□□ -1.61
DNL4Q08387 TUB3YML124C 1338 nt5.02□□□□□ -1.61
DNL4Q08387 CDC10YCR002C 969 nt5.02□□□□□ -1.61
DNL4Q08387 YHR095WYHR095W 495 nt5.02□□□□□ -1.61
DNL4Q08387 YLR122CYLR122C 378 nt5.02□□□□□ -1.61
DNL4Q08387 ZPS1YOL154W 750 nt5.02□□□□□ -1.61
DNL4Q08387 PEP4YPL154C 1218 nt5.02□□□□□ -1.61
DNL4Q08387 TPS3YMR261C 3165 nt5.02□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms