Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.62■■■□□ 2.65
COL16A1Q07092 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL16A1Q07092 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
COL16A1Q07092 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL16A1Q07092 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
COL16A1Q07092 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.61■■■□□ 2.65
COL16A1Q07092 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL16A1Q07092 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.61■■■□□ 2.65
COL16A1Q07092 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.6■■■□□ 2.65
COL16A1Q07092 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.6■■■□□ 2.65
COL16A1Q07092 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
COL16A1Q07092 ABCB10P1-201ENST00000614297 2181 ntBASIC31.6■■■□□ 2.65
COL16A1Q07092 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC31.6■■■□□ 2.65
COL16A1Q07092 AICDA-202ENST00000537228 667 ntTSL 5 BASIC31.6■■■□□ 2.65
COL16A1Q07092 AC131274.2-201ENST00000580697 1507 ntBASIC31.59■■■□□ 2.65
COL16A1Q07092 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL16A1Q07092 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.59■■■□□ 2.65
COL16A1Q07092 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.59■■■□□ 2.65
COL16A1Q07092 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL16A1Q07092 AC006015.1-201ENST00000429970 570 ntBASIC31.58■■■□□ 2.65
COL16A1Q07092 IGHV3-19-201ENST00000521488 291 ntBASIC31.58■■■□□ 2.65
COL16A1Q07092 KRT18P61-201ENST00000585825 1298 ntBASIC31.58■■■□□ 2.65
COL16A1Q07092 AC080038.1-201ENST00000611274 1154 ntBASIC31.58■■■□□ 2.65
COL16A1Q07092 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COL16A1Q07092 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
COL16A1Q07092 MIR572-201ENST00000384983 95 ntBASIC31.57■■■□□ 2.64
COL16A1Q07092 AL354811.1-201ENST00000610286 706 ntBASIC31.57■■■□□ 2.64
COL16A1Q07092 AC009086.3-201ENST00000623486 1008 ntBASIC31.57■■■□□ 2.64
COL16A1Q07092 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL16A1Q07092 TMEM191A-211ENST00000637163 1067 ntBASIC31.57■■■□□ 2.64
COL16A1Q07092 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.56■■■□□ 2.64
COL16A1Q07092 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC31.56■■■□□ 2.64
COL16A1Q07092 CDCA4P2-201ENST00000441182 718 ntBASIC31.56■■■□□ 2.64
COL16A1Q07092 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL16A1Q07092 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL16A1Q07092 AL355802.2-201ENST00000402069 882 ntBASIC31.55■■■□□ 2.64
COL16A1Q07092 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC31.55■■■□□ 2.64
COL16A1Q07092 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.55■■■□□ 2.64
COL16A1Q07092 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL16A1Q07092 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
COL16A1Q07092 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL16A1Q07092 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
COL16A1Q07092 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
COL16A1Q07092 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL16A1Q07092 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL16A1Q07092 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.53■■■□□ 2.64
COL16A1Q07092 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL16A1Q07092 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
COL16A1Q07092 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.53■■■□□ 2.64
COL16A1Q07092 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.53■■■□□ 2.64
COL16A1Q07092 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.53■■■□□ 2.64
COL16A1Q07092 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.52■■■□□ 2.64
COL16A1Q07092 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL16A1Q07092 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL16A1Q07092 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.52■■■□□ 2.64
COL16A1Q07092 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC31.52■■■□□ 2.64
COL16A1Q07092 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.52■■■□□ 2.64
COL16A1Q07092 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.52■■■□□ 2.64
COL16A1Q07092 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
COL16A1Q07092 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
COL16A1Q07092 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
COL16A1Q07092 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
COL16A1Q07092 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
COL16A1Q07092 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.63
COL16A1Q07092 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.51■■■□□ 2.63
COL16A1Q07092 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
COL16A1Q07092 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.5■■■□□ 2.63
COL16A1Q07092 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.5■■■□□ 2.63
COL16A1Q07092 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.5■■■□□ 2.63
COL16A1Q07092 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL16A1Q07092 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
COL16A1Q07092 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.49■■■□□ 2.63
COL16A1Q07092 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
COL16A1Q07092 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.49■■■□□ 2.63
COL16A1Q07092 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.49■■■□□ 2.63
COL16A1Q07092 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.49■■■□□ 2.63
COL16A1Q07092 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.48■■■□□ 2.63
COL16A1Q07092 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL16A1Q07092 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.48■■■□□ 2.63
COL16A1Q07092 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.48■■■□□ 2.63
COL16A1Q07092 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
COL16A1Q07092 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
COL16A1Q07092 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.47■■■□□ 2.63
COL16A1Q07092 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
COL16A1Q07092 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.47■■■□□ 2.63
COL16A1Q07092 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
COL16A1Q07092 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
COL16A1Q07092 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
COL16A1Q07092 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
COL16A1Q07092 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
COL16A1Q07092 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC31.46■■■□□ 2.63
COL16A1Q07092 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL16A1Q07092 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
COL16A1Q07092 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL16A1Q07092 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.46■■■□□ 2.63
COL16A1Q07092 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.46■■■□□ 2.63
COL16A1Q07092 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
COL16A1Q07092 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.45■■■□□ 2.62
COL16A1Q07092 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
COL16A1Q07092 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms