Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.86■■□□□ 1.09
GABREP78334 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.86■■□□□ 1.09
GABREP78334 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GABREP78334 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GABREP78334 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GABREP78334 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
GABREP78334 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
GABREP78334 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GABREP78334 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.85■■□□□ 1.09
GABREP78334 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.85■■□□□ 1.09
GABREP78334 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GABREP78334 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
GABREP78334 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GABREP78334 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GABREP78334 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GABREP78334 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GABREP78334 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GABREP78334 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.84■■□□□ 1.09
GABREP78334 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.84■■□□□ 1.09
GABREP78334 AC131274.2-201ENST00000580697 1507 ntBASIC21.84■■□□□ 1.09
GABREP78334 AC009102.2-201ENST00000606772 1639 ntBASIC21.84■■□□□ 1.09
GABREP78334 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
GABREP78334 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.83■■□□□ 1.09
GABREP78334 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GABREP78334 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GABREP78334 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GABREP78334 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.83■■□□□ 1.09
GABREP78334 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GABREP78334 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
GABREP78334 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GABREP78334 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GABREP78334 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GABREP78334 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GABREP78334 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.82■■□□□ 1.08
GABREP78334 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.82■■□□□ 1.08
GABREP78334 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.82■■□□□ 1.08
GABREP78334 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.82■■□□□ 1.08
GABREP78334 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.81■■□□□ 1.08
GABREP78334 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GABREP78334 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.81■■□□□ 1.08
GABREP78334 AC136469.2-201ENST00000623944 1028 ntBASIC21.81■■□□□ 1.08
GABREP78334 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GABREP78334 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GABREP78334 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GABREP78334 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GABREP78334 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
GABREP78334 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.8■■□□□ 1.08
GABREP78334 AC241377.3-202ENST00000626088 1088 ntBASIC21.8■■□□□ 1.08
GABREP78334 AC241585.3-202ENST00000628937 1088 ntBASIC21.8■■□□□ 1.08
GABREP78334 AC245100.8-202ENST00000629247 1058 ntBASIC21.8■■□□□ 1.08
GABREP78334 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GABREP78334 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GABREP78334 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
GABREP78334 AC010501.1-201ENST00000606270 1962 ntBASIC21.79■■□□□ 1.08
GABREP78334 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.79■■□□□ 1.08
GABREP78334 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.79■■□□□ 1.08
GABREP78334 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GABREP78334 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
GABREP78334 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GABREP78334 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GABREP78334 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.78■■□□□ 1.08
GABREP78334 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.78■■□□□ 1.08
GABREP78334 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
GABREP78334 AC233992.3-201ENST00000607491 485 ntBASIC21.78■■□□□ 1.08
GABREP78334 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
GABREP78334 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.78■■□□□ 1.08
GABREP78334 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
GABREP78334 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.78■■□□□ 1.08
GABREP78334 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GABREP78334 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GABREP78334 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GABREP78334 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.77■■□□□ 1.08
GABREP78334 C17orf82-201ENST00000623772 1530 ntBASIC21.77■■□□□ 1.08
GABREP78334 AC090192.1-201ENST00000517740 490 ntBASIC21.77■■□□□ 1.08
GABREP78334 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.77■■□□□ 1.08
GABREP78334 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.77■■□□□ 1.08
GABREP78334 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GABREP78334 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GABREP78334 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GABREP78334 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.77■■□□□ 1.07
GABREP78334 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.76■■□□□ 1.07
GABREP78334 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GABREP78334 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
GABREP78334 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.76■■□□□ 1.07
GABREP78334 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GABREP78334 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GABREP78334 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GABREP78334 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.76■■□□□ 1.07
GABREP78334 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.76■■□□□ 1.07
GABREP78334 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GABREP78334 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GABREP78334 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.76■■□□□ 1.07
GABREP78334 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GABREP78334 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GABREP78334 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.75■■□□□ 1.07
GABREP78334 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GABREP78334 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms