Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDE1AP54750 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDE1AP54750 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
PDE1AP54750 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.06■■■□□ 2.08
PDE1AP54750 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.06■■■□□ 2.08
PDE1AP54750 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PDE1AP54750 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.06■■■□□ 2.08
PDE1AP54750 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.06■■■□□ 2.08
PDE1AP54750 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PDE1AP54750 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
PDE1AP54750 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PDE1AP54750 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PDE1AP54750 AC004448.1-201ENST00000458332 883 ntBASIC28.05■■■□□ 2.08
PDE1AP54750 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
PDE1AP54750 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
PDE1AP54750 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
PDE1AP54750 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.04■■■□□ 2.08
PDE1AP54750 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PDE1AP54750 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
PDE1AP54750 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PDE1AP54750 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PDE1AP54750 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
PDE1AP54750 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PDE1AP54750 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
PDE1AP54750 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.04■■■□□ 2.08
PDE1AP54750 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.04■■■□□ 2.08
PDE1AP54750 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
PDE1AP54750 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PDE1AP54750 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PDE1AP54750 ALDH1A3-203ENST00000557963 1670 ntBASIC28.03■■■□□ 2.08
PDE1AP54750 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDE1AP54750 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PDE1AP54750 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDE1AP54750 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDE1AP54750 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.03■■■□□ 2.08
PDE1AP54750 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDE1AP54750 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PDE1AP54750 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
PDE1AP54750 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PDE1AP54750 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PDE1AP54750 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.02■■■□□ 2.08
PDE1AP54750 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.02■■■□□ 2.08
PDE1AP54750 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PDE1AP54750 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.02■■■□□ 2.08
PDE1AP54750 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PDE1AP54750 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
PDE1AP54750 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
PDE1AP54750 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.01■■■□□ 2.07
PDE1AP54750 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.01■■■□□ 2.07
PDE1AP54750 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PDE1AP54750 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
PDE1AP54750 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
PDE1AP54750 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PDE1AP54750 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PDE1AP54750 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
PDE1AP54750 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28■■■□□ 2.07
PDE1AP54750 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDE1AP54750 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDE1AP54750 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDE1AP54750 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.99■■■□□ 2.07
PDE1AP54750 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
PDE1AP54750 SNX5-217ENST00000606557 1087 ntBASIC27.99■■■□□ 2.07
PDE1AP54750 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
PDE1AP54750 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.99■■■□□ 2.07
PDE1AP54750 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDE1AP54750 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.99■■■□□ 2.07
PDE1AP54750 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
PDE1AP54750 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.99■■■□□ 2.07
PDE1AP54750 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDE1AP54750 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PDE1AP54750 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.98■■■□□ 2.07
PDE1AP54750 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.98■■■□□ 2.07
PDE1AP54750 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
PDE1AP54750 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
PDE1AP54750 AC021242.3-201ENST00000607598 1377 ntBASIC27.98■■■□□ 2.07
PDE1AP54750 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PDE1AP54750 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
PDE1AP54750 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDE1AP54750 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
PDE1AP54750 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDE1AP54750 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PDE1AP54750 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.97■■■□□ 2.07
PDE1AP54750 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
PDE1AP54750 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.97■■■□□ 2.07
PDE1AP54750 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.96■■■□□ 2.07
PDE1AP54750 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.96■■■□□ 2.07
PDE1AP54750 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.96■■■□□ 2.07
PDE1AP54750 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
PDE1AP54750 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.96■■■□□ 2.07
PDE1AP54750 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.96■■■□□ 2.07
PDE1AP54750 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDE1AP54750 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.95■■■□□ 2.07
PDE1AP54750 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PDE1AP54750 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms