Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
CCR1P32246 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCR1P32246 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.78■■□□□ 1.4
CCR1P32246 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCR1P32246 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCR1P32246 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.77■■□□□ 1.4
CCR1P32246 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.77■■□□□ 1.4
CCR1P32246 MIR6724-1-201ENST00000616420 92 ntBASIC23.77■■□□□ 1.4
CCR1P32246 MIR6724-2-201ENST00000616483 92 ntBASIC23.77■■□□□ 1.4
CCR1P32246 MIR6724-4-201ENST00000617390 92 ntBASIC23.77■■□□□ 1.4
CCR1P32246 MIR6724-3-201ENST00000622482 92 ntBASIC23.77■■□□□ 1.4
CCR1P32246 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCR1P32246 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCR1P32246 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCR1P32246 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.76■■□□□ 1.39
CCR1P32246 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CCR1P32246 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.76■■□□□ 1.39
CCR1P32246 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.76■■□□□ 1.39
CCR1P32246 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCR1P32246 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.76■■□□□ 1.39
CCR1P32246 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.76■■□□□ 1.39
CCR1P32246 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCR1P32246 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCR1P32246 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCR1P32246 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCR1P32246 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCR1P32246 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.75■■□□□ 1.39
CCR1P32246 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCR1P32246 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
CCR1P32246 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.75■■□□□ 1.39
CCR1P32246 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCR1P32246 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCR1P32246 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCR1P32246 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCR1P32246 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.74■■□□□ 1.39
CCR1P32246 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCR1P32246 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCR1P32246 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CCR1P32246 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.73■■□□□ 1.39
CCR1P32246 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCR1P32246 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.73■■□□□ 1.39
CCR1P32246 ALDH1A3-203ENST00000557963 1670 ntBASIC23.73■■□□□ 1.39
CCR1P32246 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CCR1P32246 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.72■■□□□ 1.39
CCR1P32246 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCR1P32246 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.72■■□□□ 1.39
CCR1P32246 AC005703.6-201ENST00000623265 1329 ntBASIC23.72■■□□□ 1.39
CCR1P32246 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCR1P32246 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCR1P32246 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CCR1P32246 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.71■■□□□ 1.39
CCR1P32246 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.71■■□□□ 1.39
CCR1P32246 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.71■■□□□ 1.39
CCR1P32246 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.71■■□□□ 1.39
CCR1P32246 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCR1P32246 AC004812.2-201ENST00000611079 2094 ntBASIC23.71■■□□□ 1.39
CCR1P32246 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCR1P32246 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCR1P32246 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.7■■□□□ 1.39
CCR1P32246 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCR1P32246 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.7■■□□□ 1.38
CCR1P32246 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCR1P32246 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCR1P32246 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCR1P32246 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCR1P32246 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCR1P32246 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CCR1P32246 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCR1P32246 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCR1P32246 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.69■■□□□ 1.38
CCR1P32246 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.69■■□□□ 1.38
CCR1P32246 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCR1P32246 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCR1P32246 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.68■■□□□ 1.38
CCR1P32246 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCR1P32246 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCR1P32246 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.67■■□□□ 1.38
CCR1P32246 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.67■■□□□ 1.38
CCR1P32246 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.67■■□□□ 1.38
CCR1P32246 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.67■■□□□ 1.38
CCR1P32246 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.67■■□□□ 1.38
CCR1P32246 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCR1P32246 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCR1P32246 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCR1P32246 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCR1P32246 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
CCR1P32246 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.66■■□□□ 1.38
CCR1P32246 AC131212.1-201ENST00000613771 668 ntBASIC23.66■■□□□ 1.38
CCR1P32246 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCR1P32246 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CCR1P32246 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCR1P32246 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCR1P32246 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCR1P32246 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms