Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
APCP25054 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APCP25054 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
APCP25054 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
APCP25054 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APCP25054 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.64■□□□□ 0.73
APCP25054 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APCP25054 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
APCP25054 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APCP25054 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.64■□□□□ 0.73
APCP25054 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.63■□□□□ 0.73
APCP25054 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.63■□□□□ 0.73
APCP25054 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.63■□□□□ 0.73
APCP25054 AC241377.3-202ENST00000626088 1088 ntBASIC19.63■□□□□ 0.73
APCP25054 AC241585.3-202ENST00000628937 1088 ntBASIC19.63■□□□□ 0.73
APCP25054 AC245100.8-202ENST00000629247 1058 ntBASIC19.63■□□□□ 0.73
APCP25054 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
APCP25054 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.63■□□□□ 0.73
APCP25054 AC080038.1-201ENST00000611274 1154 ntBASIC19.62■□□□□ 0.73
APCP25054 TMEM191A-211ENST00000637163 1067 ntBASIC19.62■□□□□ 0.73
APCP25054 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
APCP25054 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
APCP25054 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.61■□□□□ 0.73
APCP25054 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
APCP25054 AP004609.3-201ENST00000610705 1884 ntBASIC19.61■□□□□ 0.73
APCP25054 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APCP25054 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.61■□□□□ 0.73
APCP25054 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.61■□□□□ 0.73
APCP25054 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APCP25054 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APCP25054 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
APCP25054 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APCP25054 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APCP25054 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APCP25054 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.6■□□□□ 0.73
APCP25054 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.6■□□□□ 0.73
APCP25054 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
APCP25054 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APCP25054 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APCP25054 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.6■□□□□ 0.73
APCP25054 KRT18P61-201ENST00000585825 1298 ntBASIC19.6■□□□□ 0.73
APCP25054 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.59■□□□□ 0.73
APCP25054 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.59■□□□□ 0.73
APCP25054 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.59■□□□□ 0.73
APCP25054 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
APCP25054 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 AC026185.1-201ENST00000445748 174 ntBASIC19.59■□□□□ 0.73
APCP25054 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.59■□□□□ 0.73
APCP25054 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
APCP25054 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APCP25054 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APCP25054 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
APCP25054 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.58■□□□□ 0.73
APCP25054 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APCP25054 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APCP25054 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
APCP25054 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.58■□□□□ 0.72
APCP25054 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
APCP25054 CROCCP5-201ENST00000436658 830 ntBASIC19.58■□□□□ 0.72
APCP25054 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.58■□□□□ 0.72
APCP25054 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APCP25054 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
APCP25054 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.57■□□□□ 0.72
APCP25054 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
APCP25054 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.57■□□□□ 0.72
APCP25054 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
APCP25054 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
APCP25054 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.57■□□□□ 0.72
APCP25054 NCF1B-203ENST00000435988 1254 ntBASIC19.57■□□□□ 0.72
APCP25054 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 AC093827.2-201ENST00000512654 315 ntBASIC19.57■□□□□ 0.72
APCP25054 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
APCP25054 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APCP25054 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APCP25054 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APCP25054 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APCP25054 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APCP25054 AC012414.1-201ENST00000556676 535 ntBASIC19.56■□□□□ 0.72
APCP25054 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.56■□□□□ 0.72
APCP25054 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APCP25054 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APCP25054 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms