Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CCL1P22362 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCL1P22362 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.77■□□□□ 0.76
CCL1P22362 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL1P22362 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCL1P22362 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL1P22362 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL1P22362 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCL1P22362 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCL1P22362 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCL1P22362 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.76■□□□□ 0.75
CCL1P22362 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCL1P22362 DUX4L18-201ENST00000553347 1267 ntBASIC19.76■□□□□ 0.75
CCL1P22362 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.76■□□□□ 0.75
CCL1P22362 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCL1P22362 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL1P22362 DUSP8P3-201ENST00000399571 1760 ntBASIC19.75■□□□□ 0.75
CCL1P22362 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL1P22362 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL1P22362 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL1P22362 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL1P22362 ALDH1A3-203ENST00000557963 1670 ntBASIC19.75■□□□□ 0.75
CCL1P22362 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL1P22362 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL1P22362 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL1P22362 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCL1P22362 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.74■□□□□ 0.75
CCL1P22362 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL1P22362 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL1P22362 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.74■□□□□ 0.75
CCL1P22362 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL1P22362 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCL1P22362 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL1P22362 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL1P22362 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL1P22362 AC074183.2-201ENST00000623112 922 ntBASIC19.73■□□□□ 0.75
CCL1P22362 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
CCL1P22362 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCL1P22362 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCL1P22362 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCL1P22362 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.72■□□□□ 0.75
CCL1P22362 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 AC120024.1-201ENST00000562672 995 ntBASIC19.72■□□□□ 0.75
CCL1P22362 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.72■□□□□ 0.75
CCL1P22362 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCL1P22362 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL1P22362 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL1P22362 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCL1P22362 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.71■□□□□ 0.75
CCL1P22362 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCL1P22362 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL1P22362 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL1P22362 ATP5G2P3-201ENST00000429083 425 ntBASIC19.71■□□□□ 0.75
CCL1P22362 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.71■□□□□ 0.75
CCL1P22362 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL1P22362 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCL1P22362 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL1P22362 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 C9orf163-202ENST00000624034 2573 ntBASIC19.7■□□□□ 0.74
CCL1P22362 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCL1P22362 KRT18P24-201ENST00000344739 1156 ntBASIC19.7■□□□□ 0.74
CCL1P22362 AC004987.1-201ENST00000428627 508 ntBASIC19.7■□□□□ 0.74
CCL1P22362 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCL1P22362 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL1P22362 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCL1P22362 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL1P22362 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL1P22362 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL1P22362 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL1P22362 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.69■□□□□ 0.74
CCL1P22362 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL1P22362 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL1P22362 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CCL1P22362 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
CCL1P22362 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms