Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.03■□□□□ 0.96
SMIM18P0DKX4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMIM18P0DKX4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM18P0DKX4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SMIM18P0DKX4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 RNF165-205ENST00000588679 2904 ntBASIC21.01■□□□□ 0.95
SMIM18P0DKX4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SMIM18P0DKX4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21■□□□□ 0.95
SMIM18P0DKX4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21■□□□□ 0.95
SMIM18P0DKX4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMIM18P0DKX4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMIM18P0DKX4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMIM18P0DKX4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 AC026310.3-201ENST00000625186 2373 ntBASIC20.97■□□□□ 0.95
SMIM18P0DKX4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 RARRES2P7-201ENST00000567349 469 ntBASIC20.97■□□□□ 0.95
SMIM18P0DKX4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMIM18P0DKX4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM18P0DKX4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms