Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.17■■□□□ 1.3
MMP2P08253 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MMP2P08253 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MMP2P08253 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.16■■□□□ 1.3
MMP2P08253 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.16■■□□□ 1.3
MMP2P08253 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP2P08253 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.16■■□□□ 1.3
MMP2P08253 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP2P08253 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.16■■□□□ 1.3
MMP2P08253 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.16■■□□□ 1.3
MMP2P08253 KRT125P-201ENST00000546827 989 ntBASIC23.16■■□□□ 1.3
MMP2P08253 AC092028.1-203ENST00000608262 953 ntBASIC23.16■■□□□ 1.3
MMP2P08253 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.16■■□□□ 1.3
MMP2P08253 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP2P08253 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MMP2P08253 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP2P08253 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MMP2P08253 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.15■■□□□ 1.3
MMP2P08253 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP2P08253 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
MMP2P08253 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MMP2P08253 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
MMP2P08253 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MMP2P08253 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
MMP2P08253 ALDH1A3-203ENST00000557963 1670 ntBASIC23.14■■□□□ 1.29
MMP2P08253 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.14■■□□□ 1.29
MMP2P08253 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP2P08253 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP2P08253 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP2P08253 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.14■■□□□ 1.29
MMP2P08253 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.14■■□□□ 1.29
MMP2P08253 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.14■■□□□ 1.29
MMP2P08253 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.14■■□□□ 1.29
MMP2P08253 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.14■■□□□ 1.29
MMP2P08253 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
MMP2P08253 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP2P08253 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MMP2P08253 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
MMP2P08253 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.13■■□□□ 1.29
MMP2P08253 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.13■■□□□ 1.29
MMP2P08253 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.13■■□□□ 1.29
MMP2P08253 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP2P08253 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
MMP2P08253 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP2P08253 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP2P08253 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP2P08253 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP2P08253 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
MMP2P08253 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP2P08253 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP2P08253 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
MMP2P08253 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP2P08253 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.11■■□□□ 1.29
MMP2P08253 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.11■■□□□ 1.29
MMP2P08253 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.11■■□□□ 1.29
MMP2P08253 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.11■■□□□ 1.29
MMP2P08253 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.11■■□□□ 1.29
MMP2P08253 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP2P08253 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.11■■□□□ 1.29
MMP2P08253 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP2P08253 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.1■■□□□ 1.29
MMP2P08253 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
MMP2P08253 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.1■■□□□ 1.29
MMP2P08253 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.1■■□□□ 1.29
MMP2P08253 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.1■■□□□ 1.29
MMP2P08253 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP2P08253 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
MMP2P08253 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
MMP2P08253 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MMP2P08253 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP2P08253 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
MMP2P08253 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.09■■□□□ 1.29
MMP2P08253 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.09■■□□□ 1.29
MMP2P08253 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
MMP2P08253 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.09■■□□□ 1.29
MMP2P08253 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.09■■□□□ 1.29
MMP2P08253 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP2P08253 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP2P08253 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP2P08253 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP2P08253 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.09■■□□□ 1.29
MMP2P08253 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MMP2P08253 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.08■■□□□ 1.29
MMP2P08253 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.08■■□□□ 1.29
MMP2P08253 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MMP2P08253 MIR6722-201ENST00000617286 78 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms