Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CTSBP07858 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.85■■□□□ 1.09
CTSBP07858 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.85■■□□□ 1.09
CTSBP07858 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTSBP07858 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTSBP07858 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTSBP07858 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTSBP07858 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.84■■□□□ 1.09
CTSBP07858 AL136116.3-201ENST00000402907 1138 ntBASIC21.84■■□□□ 1.09
CTSBP07858 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.84■■□□□ 1.09
CTSBP07858 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTSBP07858 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTSBP07858 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTSBP07858 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.83■■□□□ 1.09
CTSBP07858 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.83■■□□□ 1.09
CTSBP07858 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.83■■□□□ 1.09
CTSBP07858 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTSBP07858 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.82■■□□□ 1.08
CTSBP07858 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.82■■□□□ 1.08
CTSBP07858 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.82■■□□□ 1.08
CTSBP07858 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTSBP07858 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CTSBP07858 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSBP07858 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.81■■□□□ 1.08
CTSBP07858 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSBP07858 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.81■■□□□ 1.08
CTSBP07858 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTSBP07858 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSBP07858 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTSBP07858 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.8■■□□□ 1.08
CTSBP07858 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.8■■□□□ 1.08
CTSBP07858 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSBP07858 AC005703.6-201ENST00000623265 1329 ntBASIC21.8■■□□□ 1.08
CTSBP07858 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CTSBP07858 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.79■■□□□ 1.08
CTSBP07858 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.79■■□□□ 1.08
CTSBP07858 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSBP07858 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CTSBP07858 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CTSBP07858 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CTSBP07858 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CTSBP07858 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.78■■□□□ 1.08
CTSBP07858 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.78■■□□□ 1.08
CTSBP07858 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.78■■□□□ 1.08
CTSBP07858 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSBP07858 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSBP07858 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTSBP07858 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSBP07858 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTSBP07858 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CTSBP07858 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSBP07858 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTSBP07858 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.77■■□□□ 1.08
CTSBP07858 AL139125.2-201ENST00000623134 1869 ntBASIC21.77■■□□□ 1.08
CTSBP07858 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CTSBP07858 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSBP07858 LINC01124-201ENST00000409786 2117 ntBASIC21.76■■□□□ 1.07
CTSBP07858 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSBP07858 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSBP07858 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.76■■□□□ 1.07
CTSBP07858 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CTSBP07858 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSBP07858 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTSBP07858 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.75■■□□□ 1.07
CTSBP07858 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CTSBP07858 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTSBP07858 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
CTSBP07858 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms