Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
CHGBP05060 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHGBP05060 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.67■■■□□ 2.02
CHGBP05060 AC131212.1-201ENST00000613771 668 ntBASIC27.67■■■□□ 2.02
CHGBP05060 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
CHGBP05060 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHGBP05060 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHGBP05060 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHGBP05060 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.66■■■□□ 2.02
CHGBP05060 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.66■■■□□ 2.02
CHGBP05060 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.66■■■□□ 2.02
CHGBP05060 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.66■■■□□ 2.02
CHGBP05060 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
CHGBP05060 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CHGBP05060 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.65■■■□□ 2.02
CHGBP05060 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.65■■■□□ 2.02
CHGBP05060 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.65■■■□□ 2.02
CHGBP05060 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.65■■■□□ 2.02
CHGBP05060 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHGBP05060 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.65■■■□□ 2.02
CHGBP05060 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHGBP05060 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.64■■■□□ 2.02
CHGBP05060 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHGBP05060 MIR6722-201ENST00000617286 78 ntBASIC27.64■■■□□ 2.02
CHGBP05060 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.64■■■□□ 2.02
CHGBP05060 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHGBP05060 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.64■■■□□ 2.01
CHGBP05060 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
CHGBP05060 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
CHGBP05060 AC093323.1-202ENST00000635031 2045 ntBASIC27.63■■■□□ 2.01
CHGBP05060 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
CHGBP05060 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHGBP05060 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHGBP05060 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CHGBP05060 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.62■■■□□ 2.01
CHGBP05060 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.62■■■□□ 2.01
CHGBP05060 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.62■■■□□ 2.01
CHGBP05060 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.62■■■□□ 2.01
CHGBP05060 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
CHGBP05060 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
CHGBP05060 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
CHGBP05060 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
CHGBP05060 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHGBP05060 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CHGBP05060 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHGBP05060 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHGBP05060 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.61■■■□□ 2.01
CHGBP05060 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CHGBP05060 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHGBP05060 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.61■■■□□ 2.01
CHGBP05060 AL117332.1-201ENST00000622628 974 ntBASIC27.61■■■□□ 2.01
CHGBP05060 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CHGBP05060 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CHGBP05060 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.6■■■□□ 2.01
CHGBP05060 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.6■■■□□ 2.01
CHGBP05060 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.6■■■□□ 2.01
CHGBP05060 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHGBP05060 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.6■■■□□ 2.01
CHGBP05060 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHGBP05060 MIR6724-1-201ENST00000616420 92 ntBASIC27.6■■■□□ 2.01
CHGBP05060 MIR6724-2-201ENST00000616483 92 ntBASIC27.6■■■□□ 2.01
CHGBP05060 MIR6724-4-201ENST00000617390 92 ntBASIC27.6■■■□□ 2.01
CHGBP05060 MIR6724-3-201ENST00000622482 92 ntBASIC27.6■■■□□ 2.01
CHGBP05060 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.6■■■□□ 2.01
CHGBP05060 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHGBP05060 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHGBP05060 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.59■■■□□ 2.01
CHGBP05060 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.59■■■□□ 2.01
CHGBP05060 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHGBP05060 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.59■■■□□ 2.01
CHGBP05060 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.59■■■□□ 2.01
CHGBP05060 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHGBP05060 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHGBP05060 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.58■■■□□ 2.01
CHGBP05060 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
CHGBP05060 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHGBP05060 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
CHGBP05060 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.58■■■□□ 2.01
CHGBP05060 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.58■■■□□ 2.01
CHGBP05060 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
CHGBP05060 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHGBP05060 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CHGBP05060 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHGBP05060 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.58■■■□□ 2
CHGBP05060 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHGBP05060 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHGBP05060 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHGBP05060 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.57■■■□□ 2
CHGBP05060 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
CHGBP05060 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms