Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DPB1P04440 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DPB1P04440 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DPB1P04440 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DPB1P04440 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HLA-DPB1P04440 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 KRT18P60-201ENST00000312876 1297 ntBASIC20.46■□□□□ 0.87
HLA-DPB1P04440 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 NTF6A-201ENST00000591175 560 ntBASIC20.46■□□□□ 0.87
HLA-DPB1P04440 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPB1P04440 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HLA-DPB1P04440 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 SPCS2P3-201ENST00000500401 656 ntBASIC20.44■□□□□ 0.86
HLA-DPB1P04440 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HLA-DPB1P04440 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPB1P04440 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.42■□□□□ 0.86
HLA-DPB1P04440 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPB1P04440 EP400NL-214ENST00000641289 2402 ntBASIC20.42■□□□□ 0.86
HLA-DPB1P04440 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 AC129492.7-201ENST00000622992 756 ntBASIC20.41■□□□□ 0.86
HLA-DPB1P04440 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-DPB1P04440 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 DUX4L9-201ENST00000449051 1259 ntBASIC20.4■□□□□ 0.86
HLA-DPB1P04440 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 LINC00565-201ENST00000562710 2331 ntBASIC20.4■□□□□ 0.86
HLA-DPB1P04440 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
HLA-DPB1P04440 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DPB1P04440 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.39■□□□□ 0.86
HLA-DPB1P04440 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DPB1P04440 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HLA-DPB1P04440 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DPB1P04440 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.39■□□□□ 0.86
HLA-DPB1P04440 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 AC018755.3-202ENST00000596210 929 ntBASIC20.39■□□□□ 0.85
HLA-DPB1P04440 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPB1P04440 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms