Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.87■■□□□ 1.41
KRT1P04264 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.87■■□□□ 1.41
KRT1P04264 AC074183.2-201ENST00000623112 922 ntBASIC23.87■■□□□ 1.41
KRT1P04264 AC131274.2-201ENST00000580697 1507 ntBASIC23.87■■□□□ 1.41
KRT1P04264 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.87■■□□□ 1.41
KRT1P04264 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
KRT1P04264 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
KRT1P04264 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.87■■□□□ 1.41
KRT1P04264 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.87■■□□□ 1.41
KRT1P04264 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT1P04264 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
KRT1P04264 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.86■■□□□ 1.41
KRT1P04264 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 AC012354.3-201ENST00000623734 483 ntBASIC23.86■■□□□ 1.41
KRT1P04264 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.86■■□□□ 1.41
KRT1P04264 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT1P04264 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
KRT1P04264 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.85■■□□□ 1.41
KRT1P04264 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
KRT1P04264 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.85■■□□□ 1.41
KRT1P04264 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.85■■□□□ 1.41
KRT1P04264 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT1P04264 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
KRT1P04264 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT1P04264 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT1P04264 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.84■■□□□ 1.41
KRT1P04264 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.84■■□□□ 1.41
KRT1P04264 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.84■■□□□ 1.41
KRT1P04264 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.84■■□□□ 1.41
KRT1P04264 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT1P04264 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT1P04264 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT1P04264 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT1P04264 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT1P04264 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT1P04264 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT1P04264 THA1P-201ENST00000590384 1145 ntBASIC23.83■■□□□ 1.41
KRT1P04264 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT1P04264 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.83■■□□□ 1.41
KRT1P04264 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
KRT1P04264 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KRT1P04264 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
KRT1P04264 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT1P04264 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.82■■□□□ 1.4
KRT1P04264 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT1P04264 AC133561.1-201ENST00000568600 2415 ntBASIC23.82■■□□□ 1.4
KRT1P04264 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT1P04264 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT1P04264 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT1P04264 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
KRT1P04264 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT1P04264 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT1P04264 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KRT1P04264 AC068473.5-201ENST00000616428 2072 ntBASIC23.81■■□□□ 1.4
KRT1P04264 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT1P04264 AL033527.3-201ENST00000566366 1196 ntBASIC23.81■■□□□ 1.4
KRT1P04264 MIR4281-201ENST00000580852 62 ntBASIC23.81■■□□□ 1.4
KRT1P04264 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT1P04264 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.8■■□□□ 1.4
KRT1P04264 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.8■■□□□ 1.4
KRT1P04264 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT1P04264 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.8■■□□□ 1.4
KRT1P04264 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT1P04264 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT1P04264 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT1P04264 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT1P04264 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT1P04264 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT1P04264 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT1P04264 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.79■■□□□ 1.4
KRT1P04264 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT1P04264 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT1P04264 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT1P04264 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
KRT1P04264 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT1P04264 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT1P04264 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT1P04264 KRT18P24-201ENST00000344739 1156 ntBASIC23.78■■□□□ 1.4
KRT1P04264 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT1P04264 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT1P04264 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
KRT1P04264 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT1P04264 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT1P04264 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
KRT1P04264 ANOS2P-203ENST00000472227 1816 ntBASIC23.77■■□□□ 1.4
KRT1P04264 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms