Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HMGCRP04035 AL137784.2-201ENST00000607332 1000 ntBASIC26.07■■□□□ 1.76
HMGCRP04035 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.07■■□□□ 1.76
HMGCRP04035 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.07■■□□□ 1.76
HMGCRP04035 AC241377.3-202ENST00000626088 1088 ntBASIC26.07■■□□□ 1.76
HMGCRP04035 AC241585.3-202ENST00000628937 1088 ntBASIC26.07■■□□□ 1.76
HMGCRP04035 AC245100.8-202ENST00000629247 1058 ntBASIC26.07■■□□□ 1.76
HMGCRP04035 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HMGCRP04035 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HMGCRP04035 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
HMGCRP04035 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HMGCRP04035 BX842568.3-201ENST00000418104 571 ntBASIC26.06■■□□□ 1.76
HMGCRP04035 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.06■■□□□ 1.76
HMGCRP04035 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.06■■□□□ 1.76
HMGCRP04035 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.06■■□□□ 1.76
HMGCRP04035 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HMGCRP04035 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
HMGCRP04035 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCRP04035 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCRP04035 AC131274.2-201ENST00000580697 1507 ntBASIC26.05■■□□□ 1.76
HMGCRP04035 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.05■■□□□ 1.76
HMGCRP04035 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCRP04035 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
HMGCRP04035 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.05■■□□□ 1.76
HMGCRP04035 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.05■■□□□ 1.76
HMGCRP04035 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCRP04035 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCRP04035 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCRP04035 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HMGCRP04035 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCRP04035 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.04■■□□□ 1.76
HMGCRP04035 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.04■■□□□ 1.76
HMGCRP04035 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HMGCRP04035 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCRP04035 C17orf82-201ENST00000623772 1530 ntBASIC26.04■■□□□ 1.76
HMGCRP04035 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCRP04035 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCRP04035 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
HMGCRP04035 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.03■■□□□ 1.76
HMGCRP04035 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.03■■□□□ 1.76
HMGCRP04035 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCRP04035 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.03■■□□□ 1.76
HMGCRP04035 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.03■■□□□ 1.76
HMGCRP04035 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.03■■□□□ 1.76
HMGCRP04035 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCRP04035 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
HMGCRP04035 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
HMGCRP04035 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 KRT18P5-201ENST00000436075 1291 ntBASIC26.02■■□□□ 1.76
HMGCRP04035 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.02■■□□□ 1.76
HMGCRP04035 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.02■■□□□ 1.76
HMGCRP04035 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
HMGCRP04035 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCRP04035 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCRP04035 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.01■■□□□ 1.75
HMGCRP04035 YBX1P1-201ENST00000445822 960 ntBASIC26.01■■□□□ 1.75
HMGCRP04035 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26■■□□□ 1.75
HMGCRP04035 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HMGCRP04035 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26■■□□□ 1.75
HMGCRP04035 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26■■□□□ 1.75
HMGCRP04035 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HMGCRP04035 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26■■□□□ 1.75
HMGCRP04035 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCRP04035 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.99■■□□□ 1.75
HMGCRP04035 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
HMGCRP04035 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCRP04035 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCRP04035 AC006455.2-201ENST00000429931 906 ntBASIC25.99■■□□□ 1.75
HMGCRP04035 SLC47A1P1-202ENST00000449666 945 ntBASIC25.99■■□□□ 1.75
HMGCRP04035 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCRP04035 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.99■■□□□ 1.75
HMGCRP04035 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.99■■□□□ 1.75
HMGCRP04035 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.99■■□□□ 1.75
HMGCRP04035 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCRP04035 ERN1-208ENST00000606895 2068 ntBASIC25.99■■□□□ 1.75
HMGCRP04035 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCRP04035 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.98■■□□□ 1.75
HMGCRP04035 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCRP04035 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.98■■□□□ 1.75
HMGCRP04035 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.98■■□□□ 1.75
HMGCRP04035 AC092437.1-201ENST00000624794 1048 ntBASIC25.98■■□□□ 1.75
HMGCRP04035 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCRP04035 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCRP04035 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCRP04035 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.97■■□□□ 1.75
HMGCRP04035 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.97■■□□□ 1.75
HMGCRP04035 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.97■■□□□ 1.75
HMGCRP04035 AL031602.1-201ENST00000633169 911 ntBASIC25.97■■□□□ 1.75
HMGCRP04035 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
HMGCRP04035 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
HMGCRP04035 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HMGCRP04035 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HMGCRP04035 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
HMGCRP04035 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.96■■□□□ 1.75
HMGCRP04035 MIR3181-201ENST00000578512 73 ntBASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms