Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV12-3P01733 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV12-3P01733 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV12-3P01733 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV12-3P01733 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV12-3P01733 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV12-3P01733 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV12-3P01733 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV12-3P01733 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV12-3P01733 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV12-3P01733 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV12-3P01733 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV12-3P01733 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV12-3P01733 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV12-3P01733 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV12-3P01733 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV12-3P01733 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV12-3P01733 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV12-3P01733 AL161729.1-201ENST00000604104 1402 ntBASIC17.67■□□□□ 0.42
TRBV12-3P01733 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV12-3P01733 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.67■□□□□ 0.42
TRBV12-3P01733 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV12-3P01733 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV12-3P01733 MTDHP2-201ENST00000601468 714 ntBASIC17.67■□□□□ 0.42
TRBV12-3P01733 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV12-3P01733 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV12-3P01733 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV12-3P01733 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV12-3P01733 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV12-3P01733 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRBV12-3P01733 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV12-3P01733 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV12-3P01733 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV12-3P01733 AC010997.5-201ENST00000609182 354 ntBASIC17.65■□□□□ 0.42
TRBV12-3P01733 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRBV12-3P01733 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV12-3P01733 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV12-3P01733 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 KRT16P3-201ENST00000439127 1283 ntBASIC17.64■□□□□ 0.41
TRBV12-3P01733 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV12-3P01733 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 ALDH1A3-203ENST00000557963 1670 ntBASIC17.64■□□□□ 0.41
TRBV12-3P01733 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV12-3P01733 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV12-3P01733 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV12-3P01733 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV12-3P01733 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV12-3P01733 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV12-3P01733 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV12-3P01733 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV12-3P01733 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV12-3P01733 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.63■□□□□ 0.41
TRBV12-3P01733 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV12-3P01733 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV12-3P01733 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms