Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TIMP1P01033 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L2-201ENST00000561772 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L6-201ENST00000626483 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L1-201ENST00000627662 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L8-201ENST00000629013 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L3-201ENST00000630187 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L7-201ENST00000630678 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 DUX4L5-201ENST00000630834 1275 ntBASIC25.16■■□□□ 1.62
TIMP1P01033 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
TIMP1P01033 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
TIMP1P01033 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TIMP1P01033 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TIMP1P01033 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.15■■□□□ 1.62
TIMP1P01033 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TIMP1P01033 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
TIMP1P01033 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.15■■□□□ 1.62
TIMP1P01033 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.14■■□□□ 1.62
TIMP1P01033 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TIMP1P01033 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.14■■□□□ 1.62
TIMP1P01033 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TIMP1P01033 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.14■■□□□ 1.62
TIMP1P01033 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.14■■□□□ 1.62
TIMP1P01033 AC009086.3-201ENST00000623486 1008 ntBASIC25.14■■□□□ 1.62
TIMP1P01033 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TIMP1P01033 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TIMP1P01033 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TIMP1P01033 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TIMP1P01033 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
TIMP1P01033 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.13■■□□□ 1.61
TIMP1P01033 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TIMP1P01033 AC126544.1-201ENST00000580842 1059 ntBASIC25.13■■□□□ 1.61
TIMP1P01033 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.13■■□□□ 1.61
TIMP1P01033 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TIMP1P01033 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.12■■□□□ 1.61
TIMP1P01033 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.12■■□□□ 1.61
TIMP1P01033 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TIMP1P01033 ID1-201ENST00000376105 1233 ntBASIC25.12■■□□□ 1.61
TIMP1P01033 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.12■■□□□ 1.61
TIMP1P01033 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
TIMP1P01033 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
TIMP1P01033 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.12■■□□□ 1.61
TIMP1P01033 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.12■■□□□ 1.61
TIMP1P01033 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TIMP1P01033 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TIMP1P01033 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TIMP1P01033 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
TIMP1P01033 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TIMP1P01033 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TIMP1P01033 AC004911.1-201ENST00000416316 871 ntBASIC25.11■■□□□ 1.61
TIMP1P01033 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.11■■□□□ 1.61
TIMP1P01033 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TIMP1P01033 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.11■■□□□ 1.61
TIMP1P01033 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.11■■□□□ 1.61
TIMP1P01033 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
TIMP1P01033 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TIMP1P01033 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TIMP1P01033 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.11■■□□□ 1.61
TIMP1P01033 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.1■■□□□ 1.61
TIMP1P01033 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.1■■□□□ 1.61
TIMP1P01033 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TIMP1P01033 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
TIMP1P01033 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.1■■□□□ 1.61
TIMP1P01033 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
TIMP1P01033 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
TIMP1P01033 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.09■■□□□ 1.61
TIMP1P01033 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.09■■□□□ 1.61
TIMP1P01033 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
TIMP1P01033 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.09■■□□□ 1.61
TIMP1P01033 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.09■■□□□ 1.61
TIMP1P01033 TSPY26P-201ENST00000476365 1326 ntBASIC25.09■■□□□ 1.61
TIMP1P01033 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TIMP1P01033 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TIMP1P01033 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TIMP1P01033 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TIMP1P01033 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TIMP1P01033 AC123595.1-201ENST00000440769 1046 ntBASIC25.08■■□□□ 1.61
TIMP1P01033 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.08■■□□□ 1.61
TIMP1P01033 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TIMP1P01033 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TIMP1P01033 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.08■■□□□ 1.61
TIMP1P01033 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.08■■□□□ 1.6
TIMP1P01033 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TIMP1P01033 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
TIMP1P01033 AC027612.3-201ENST00000413684 1047 ntBASIC25.07■■□□□ 1.6
TIMP1P01033 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TIMP1P01033 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.07■■□□□ 1.6
TIMP1P01033 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
TIMP1P01033 AL358852.1-201ENST00000623174 1268 ntBASIC25.07■■□□□ 1.6
TIMP1P01033 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TIMP1P01033 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TIMP1P01033 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.06■■□□□ 1.6
TIMP1P01033 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TIMP1P01033 AC010501.1-201ENST00000606270 1962 ntBASIC25.06■■□□□ 1.6
TIMP1P01033 AL022069.1-201ENST00000568025 1636 ntBASIC25.06■■□□□ 1.6
TIMP1P01033 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.06■■□□□ 1.6
TIMP1P01033 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.06■■□□□ 1.6
TIMP1P01033 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.06■■□□□ 1.6
TIMP1P01033 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms